Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0534 ATGGGGAATCATATGAGCAAGAAGATTCCTGAAACATCGTCTGCTGTTAATTTGAGTACTGAATTGCATTATAGATCTGAGCTGAGCTCCTATGAGGCTGCTTGCAAGATTGATAATGATTTGCAATCCTTTGACACAAACCTTCAAGCTCGAACGAATCAAGTTATCAACACGCTTGCTGTTGGTGTTGAAGTTCGAGCCCTTTCTTTTGAGTCTTTGAAACAAGTCACGGAATGTCTTCTGGAGATGAATCAGGAAGTTGTTAAAGTGATCTTGGACTGCAAGAAGGATATATGGAAGAGCCAAGATCTGTTTGAACTGGTGGAGGAGTACTTTGAGAACAGTTTGCAAACGTTGGATTTCTGTGCTGCGCTGGAGAAGTGCCTGAAGCGCGCTCGCGATAGCCAGCTTCTGATTCTGGTAGCTCTTCAACAGTTTGAGGAGGAATCATCATCAGAGGTAGGAGGATCGAACAACCGCTACACGAGGACATTGCAAGAATTGAAGAATTTCAAGGATGCTGGTGACCCTTTCACAGAAGAGTTCTTCCAAATTTTCCAATCTGTTTACAAGCAGCAGATACTCATGCTTGAGAAGTTGCAAGTTAGAAAGAGCAAGCTTGACAAGAAGCTGAAATATATTCATTCATGGAGGAAGGTTTCAAGCATGATATTTGTAGCTACATTTGCTGCTGTTTTGATATGCTCAGTGGTAGCTGCAGCAATTGCAGCTCCACCTGTTGCTGCTGCTTTAGCTGCTGCTACCGCAATCCCAATTGGTTCAATGGGGAAGTGGATTGATTCCCTTTGGAGGAACTATGAAAATGCATTGAAAGGGCAGAAGGAAGTGATTAGCTCAATGCAGGCTGGTACCTATGTTGCTATCAAGGACTTGGATAACATCAGGATTCTCATTGATAAGCTGGAAGTTGAGATTGAATCTCTGTTGCATAATGTGGATTTTGCCATTGCAGAAGAAGCTGTGAAGATTGCAATAGAGGAGATCAAGAAGAAGCTGGGAGTGTTTATGAAGAATGTTGATGATATAGGAGTTCAAGCTGATATTTGTAGCCGTGACATTAGGAGGGCAAGGACTGTGGTCCTGCAGAGAATCATAAAACACCCCAACAATTGA 1134 0.4268 MGNHMSKKIPETSSAVNLSTELHYRSELSSYEAACKIDNDLQSFDTNLQARTNQVINTLAVGVEVRALSFESLKQVTECLLEMNQEVVKVILDCKKDIWKSQDLFELVEEYFENSLQTLDFCAALEKCLKRARDSQLLILVALQQFEEESSSEVGGSNNRYTRTLQELKNFKDAGDPFTEEFFQIFQSVYKQQILMLEKLQVRKSKLDKKLKYIHSWRKVSSMIFVATFAAVLICSVVAAAIAAPPVAAALAAATAIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTYVAIKDLDNIRILIDKLEVEIESLLHNVDFAIAEEAVKIAIEEIKKKLGVFMKNVDDIGVQADICSRDIRRARTVVLQRIIKHPNN* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0534 377 PANTHER UPF0496 PROTEIN 1 1 374 - -
Lja3g0534 377 Coils Coil 298 325 - -
Lja3g0534 377 PANTHER UPF0496 PROTEIN 3-RELATED 1 374 IPR007749 -
Lja3g0534 377 Pfam Protein of unknown function (DUF677) 41 371 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0534 Lja-Chr3 5351178 5353489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0534 - - gmx:100804335 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0534 3 5351178 5353489 Lja3g0534 3 5351178 5353489 ECH
Lja3g0534 3 5351178 5353489 Lja2g3404 2 78397524 78398645 ECH