Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3404 ATGGGGGGCCATATGAGCAAGACCCCTGAAACATCTTCTGGTAACAACCTTAATACTGATATGGCTACTGAACTGAGGTCATATGAGGCTGCCTGCGAGCTTGACTCTGATTTGAATTCCTTTGACACCAACCTTCAAGCTCAAACGAATCAGGCCATCAACACTCAAGCAGTTGGAGTTGAATTTCGGTCCCTTTCGTTTGATTCTCTCAAACAAGTTGTTGAAAGCCTTCTTGAGATGAATCAGGAAGTTGTCAAGGTAATATTAGATTGTAAGAAAGATATATGCAAGAGTCAAGAACTTTTAGAGCTTGTAGAGGAGTACTTTGAAAGTAGCATGCAAAATGTAGATTTATGTACTGCATTACAGAATTGCCTAAAGAGTGCTAGGGAAAGTCAATTGCATATTCTCACGGCTCTCCAACAGTTTGAAGAAGAAACAGGGTTGGGAGAGAACCGCTACGCGAGGACATTACAGGAACTGAAGAATTTCAAGGCTGCTGGTGGCAGCCCTTTCACTGGGGAATTTTTCCAAATATATCAATCTGTTTATAATCAGCAAATAGTCATGCTTGAGAAGCTGCAACTCGGTAAAAACAAGAATGATGAGAAACTAAAGCAAGTTAATATTTGGAGGAAGGTTTCGTGCACCATATCTGTAGCCACAATTGCTGCTGTCTTGATCGGCTCAGTTGTAGCTGCAGCCATTGCTTCTCCTCATGTTGCTGCTGCTCTAGCTTCTGTCACTGCAATCCCAATTGGTTCAATGGGAAAGTGGATTGACTCCCTCTTGCAGAACTATGAAAATGCACTGAAAGGACTTAAGGAAGTAACTATCTCAATTCATGTTGGCACCTATGTTGCTAGAAAGGATTTAGACAACATCCGCGTTCTCATTAATCGGCTGGAAGTTGATATTGAGTCTCTACAAAAGAATGTGGATTTTGCCATTGAGGAAGAAGAAGACGCGGTGAAGGTTGCAATAGAGGCAATCCAAAAGAAGTTAGGGATTTTTATGAAAAACGTTGAAGATTTAGGAGTTCAAGCTGGTACATGTAGCCGTGACATTAGAAGGGCAAAGACTGTGGTTCTACAAAAAATCTTAAAGCTTCCCCAAAACTGA 1122 0.4135 MGGHMSKTPETSSGNNLNTDMATELRSYEAACELDSDLNSFDTNLQAQTNQAINTQAVGVEFRSLSFDSLKQVVESLLEMNQEVVKVILDCKKDICKSQELLELVEEYFESSMQNVDLCTALQNCLKSARESQLHILTALQQFEEETGLGENRYARTLQELKNFKAAGGSPFTGEFFQIYQSVYNQQIVMLEKLQLGKNKNDEKLKQVNIWRKVSCTISVATIAAVLIGSVVAAAIASPHVAAALASVTAIPIGSMGKWIDSLLQNYENALKGLKEVTISIHVGTYVARKDLDNIRVLINRLEVDIESLQKNVDFAIEEEEDAVKVAIEAIQKKLGIFMKNVEDLGVQAGTCSRDIRRAKTVVLQKILKLPQN* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3404 373 Coils Coil 292 319 - -
Lja2g3404 373 PANTHER UPF0496 PROTEIN 3-RELATED 1 370 IPR007749 -
Lja2g3404 373 Pfam Protein of unknown function (DUF677) 38 367 IPR007749 -
Lja2g3404 373 PANTHER UPF0496 PROTEIN 1 1 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3404 Lja-Chr2 78397524 78398645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3404 - - gmx:100802986 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3404 2 78397524 78398645 Lja2g3404 2 78397524 78398645 ECH
Lja3g0534 3 5351178 5353489 Lja2g3404 2 78397524 78398645 ECH