Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0531 ATGGGGAAAGGAGGTGGTTGTGTACCAAGCAAGAAGAAGGCACCAATTTTAGACACAGAAAAGAATGATCCTGTCAGTGTTAGTGTTGAAGTTCCAATTCAAAATAATGATGCAGCAATTAGTATAAGCCAAGAGGCGAAAAAGCTGAAAGTTTTCATTGTGTTCTACTCAATGTATGGCCATGTGGAGTCACTAGCGAGATCCTTGAAGAAAGGGGTTGAATCCATTGAAGGAGTTGAAGGGGTTCTATACCGTGTGGTGGAAACACTGCCTAAGGAGGTCTTGGAACTCATGAAGGCACCTGAGAAGGATGATCAGGTGCCACTGATATCTGCAGAGGAGTTGGTGGAGGCTGATGGGGTGCTGTTTGGGTTTCCGACAAGATACGGCACCATGGCAGCACAGATGAAGGCGTTTTTCGATTCAACAGGGCAGCTGTGGAAGGAACAGAAGCTGGCGGGTGTTCCTGCTGGCTTCTTTGTTAGTACCGGCACTCAGGGCGGTGGCCAAGAAACCACGGCTTGGACAGCAATTACACAGTTAGCCCACCATGGAATGCTGTATGTTCCTATTGGTTATTCCTTTGGTGCTGGAATGTTTGAAATGGACTCCATTAGAGGTGGATCTCCATATGGTGCTGGAGTTTTTGCTGGTGATGGCTCAAGGCAACCAAGTGAAACAGAGCTGGCCCTTGCTGAGTATCAAGGAAGCTACATGGCTACAATAGTCAAGAAATTGGGCCAGAAAAGCTAG 753 0.4728 MGKGGGCVPSKKKAPILDTEKNDPVSVSVEVPIQNNDAAISISQEAKKLKVFIVFYSMYGHVESLARSLKKGVESIEGVEGVLYRVVETLPKEVLELMKAPEKDDQVPLISAEELVEADGVLFGFPTRYGTMAAQMKAFFDSTGQLWKEQKLAGVPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLYVPIGYSFGAGMFEMDSIRGGSPYGAGVFAGDGSRQPSETELALAEYQGSYMATIVKKLGQKS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0531 250 Gene3D - 47 247 IPR029039 -
Lja3g0531 250 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 50 246 IPR010089 GO:0003955|GO:0010181
Lja3g0531 250 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 4 250 - -
Lja3g0531 250 ProSiteProfiles Flavodoxin-like domain profile. 51 239 IPR008254 GO:0010181
Lja3g0531 250 SUPERFAMILY Flavoproteins 50 246 IPR029039 -
Lja3g0531 250 PANTHER NAD(P)H:QUINONE OXIDOREDUCTASE, TYPE IV PROTEIN 4 250 - -
Lja3g0531 250 Pfam NADPH-dependent FMN reductase 64 191 IPR005025 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0531 Lja-Chr3 5324675 5326738 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0531 K03809 - gmx:100803804 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0531 3 5324675 5326738 Lja3g0531 3 5324675 5326738 ECH
Lja3g0531 3 5324675 5326738 Lja2g0425 2 3882867 3885246 ECH