Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0425 ATGGGTAAAGGAGGAGGTTGTGTTCCCAGCAAGAAAAAGGGACCGCTAGTCGCTCAAGATTCACCGCCTGAGGCCACTCAAGGACTCAGGGAGGCTGTGATTGAAACTGAGCAGCAAAACACCCACCCCGATGAGCCAACTAGAGTCGCATCATCGTTATCCGCTGCTGTGGGCAGCACGAAGCTGAAGATCTTCATCGTGTTCTACTCGATGTACGGGCACGTTGAAGGACTGGCGAAAAGTTTGAAGAAGGGTGTGGATATTGTGGACGGTGTCGAAGGGGTTTTGTATAGGGTTCCGGAAATATTGTCGGATGAAGTGCTGAGCCAGATGAAGGCGCCGCCCAAGGATGAGACCGTGCCGGAGATTACGGCTGCAGAACTTACTGCGGCTGACGGGGTGTTGTTTGGCTTTCCCACAAGGTATGGTGCCATGGCGGCGCAAATGAAAGCTTTCTTCGATTCCACTGGGCAGTTGTGGAAGGAGCAAAAGCTCGCAGGAAAGCCCGCTGGTTTCTTTGTCAGCACGGGCACCCAAGGCGGCGGTCAAGAAACCACAGCTTGGACAGCAATCACTCAGCTGGCACACCATGGGATGTTGTTTGTTCCTATTGGATATACATTTGGACCTGGAATGTTCAAGATGGACTCCATTAGAGGGGGTTCTCCATATGGTGCAGGAGTGTATGCTGGTGATGGCACAAGAGAGCCAACTGAAACAGAGCTGACACTTGCAGAGCATCAGGGAAAGTATATGGCTACTATAGTCAAGCGGCTCGCAGCCAAGTCATGA 792 0.5227 MGKGGGCVPSKKKGPLVAQDSPPEATQGLREAVIETEQQNTHPDEPTRVASSLSAAVGSTKLKIFIVFYSMYGHVEGLAKSLKKGVDIVDGVEGVLYRVPEILSDEVLSQMKAPPKDETVPEITAAELTAADGVLFGFPTRYGAMAAQMKAFFDSTGQLWKEQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLFVPIGYTFGPGMFKMDSIRGGSPYGAGVYAGDGTREPTETELTLAEHQGKYMATIVKRLAAKS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0425 263 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 63 259 IPR010089 GO:0003955|GO:0010181
Lja2g0425 263 Gene3D - 60 261 IPR029039 -
Lja2g0425 263 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1-LIKE 2-RELATED 6 260 - -
Lja2g0425 263 SUPERFAMILY Flavoproteins 63 259 IPR029039 -
Lja2g0425 263 Pfam NADPH-dependent FMN reductase 90 204 IPR005025 GO:0016491
Lja2g0425 263 ProSiteProfiles Flavodoxin-like domain profile. 64 252 IPR008254 GO:0010181
Lja2g0425 263 MobiDBLite consensus disorder prediction 1 28 - -
Lja2g0425 263 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 6 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0425 Lja-Chr2 3882867 3885246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0425 K03809 - gmx:100807532 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0425 2 3882867 3885246 Lja2g0425 2 3882867 3885246 ECH
Lja3g0531 3 5324675 5326738 Lja2g0425 2 3882867 3885246 ECH