Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2943 ATGGCACATTTAGATTTGGAAGGAATAAGTCATGAGAAGAAGAAAGAAGTGATTCGATTAGAGCGTGAATATGTCATTGAAATTACCAAGCCTAAGCTCATCATGAAATTAGCCAACCTCATAAAACTTAGTGCCGATAGAGTTGAGTTTTTGAAACTTTGCAAGAGAATAGAGTATACAATTCGAGCTTGGTACCTCCTACATTTTGAAGACATGATGCAACTATACTCCCTTTTTGATCCTTTATATGGGACTCAAAAGTTGAAAAACCAAAAGTTCACTTCTGAAGAAATTGATGCACATGAACAAAATTTCCTGACGCACCTTTTTAAGGTCATGAAAAAGAGTAACTTCAAGATTGTAACTGAAGATGAGCTTAATGTTGCACTTTCTGGACATTATCTTCTAAATCTTCCCATTACTGTTAATGAATCTAAGCTTGACAATGAGCTTTTGAAAACATATTTTGAAGCACACCCATATGATAACCTTCCACATTTCTACGATAAGTATATTATCTTTCGACGTGGCACGGGAATTGATCAAACAACAGATTTCTTTTTCACGGAGAAAGTGAACATACTCATAGCACGCTTTTGGGAATGTCTATTAAGAATAACTAGGTTAGAATGTTTTTTATCCAGAACATCGCAAATACATTCTAAGATGGATCCGGCGAAAGATAGTGAAATAAATTTAGAAACTCATCAAGAAGAAGTGTATGAAAGAGTAGGTCTTGAAAATATGTCTTTAAGCTTGTGTAACTTGTTGAGCAAGAATACAATCAAAGAACCAACATTTGATAGAATAATTGTTATCTACAGGCGAGCTGGTTCGTATTCTAAATCAGAACGAGGAATTTTTGTGAAGCACTTTAATAACATTCCAATGGCTGACATGGAAATAGTTCTTCCAGAAAAGAGAAGTCCTGGACTAACTCCAATGGATTGGGTCAAATTTCTTGGATCTGCAATAGTTGGGTTGGTTGCTGTAGTTAGTTCCGTGAAAGAGGCAACAATTGACTTGAAGGTCATGAGCGCAGTTCTCTCTACAGTAATTGGCTACTGTGTTAAGACTTATTTTACGTTCCAAAAAAACTTGGTTGCATACCAAAATTTGATTACACGGACTATGTATGACAAACAACTAGACAGTGGAAAGGGTACCCTTCTCCACCTATGTGATGATGTAATTCAACAAGAAGATCTCGATCAAAAGTGTGAGGAACTAATTAGAGAGGAGTTTAACTTGAGTTGTAACTTTGACGTAGATGATGCAATTGAGAAATTAGAGAAGTTGGGTATCGTCACCCGGGACACCATTGGTCGGTATCAATGTGTTGGGCTGAAACGGGCTAATGAGATAATTGGAACAACTACCGAAGAGCTGGTCGTTAAGGCAAAACAAGGAAATGTCACTCCTTGA 1425 0.3677 MAHLDLEGISHEKKKEVIRLEREYVIEITKPKLIMKLANLIKLSADRVEFLKLCKRIEYTIRAWYLLHFEDMMQLYSLFDPLYGTQKLKNQKFTSEEIDAHEQNFLTHLFKVMKKSNFKIVTEDELNVALSGHYLLNLPITVNESKLDNELLKTYFEAHPYDNLPHFYDKYIIFRRGTGIDQTTDFFFTEKVNILIARFWECLLRITRLECFLSRTSQIHSKMDPAKDSEINLETHQEEVYERVGLENMSLSLCNLLSKNTIKEPTFDRIIVIYRRAGSYSKSERGIFVKHFNNIPMADMEIVLPEKRSPGLTPMDWVKFLGSAIVGLVAVVSSVKEATIDLKVMSAVLSTVIGYCVKTYFTFQKNLVAYQNLITRTMYDKQLDSGKGTLLHLCDDVIQQEDLDQKCEELIREEFNLSCNFDVDDAIEKLEKLGIVTRDTIGRYQCVGLKRANEIIGTTTEELVVKAKQGNVTP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2943 474 PANTHER AMINOPEPTIDASE (DUF3754) 401 473 - -
Lja2g2943 474 Pfam Protein of unknown function (DUF3754) 268 388 IPR022227 -
Lja2g2943 474 PANTHER AMINOPEPTIDASE 1 401 - -
Lja2g2943 474 PANTHER AMINOPEPTIDASE (DUF3754) 1 401 - -
Lja2g2943 474 PANTHER AMINOPEPTIDASE 401 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2943 Lja-Chr2 50816871 50875186 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2943 - - gmx:100777206 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2943 2 50816871 50875186 Lja2g2943 2 50816871 50875186 ECH
Lja1g1672 1 18465112 18480631 Lja2g2943 2 50816871 50875186 PCT