Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1672 ATGGCTCAATCTGATGAAAAGGGTCGGCACAAGAAGGAAGTAATCCGTTTAGAGCGTGAATCTGTCATTCCGATTATGAAGCCTAGAATCATCATGACATTGGCCAATCTTATTGAGCATAGTTCTGACCGAGCTGAGTTTTTGAAGCTCTGCAAGAGAGTGGAGTACACTATTCGAGCTTGGTACCTTCTACAATTTGAGGATTTAATGCAACTCTACTCCCTCTTTGACCCTGTACATGGGGCGCAAAAGTTGGAACAGCAAAAGCTAGCTCCTGAGGAAATTGATGTGCTTGAACAGAACTTCTTGACATACCTATTTCAGGTCATGGAAAAGAGCAACTTCAAGGTAGTGACTGATGATGAGGTTGAAGTTGCGCATTCAGGCCAATATCTTCTGAATCTTCCCATTACTGTTGATGAGTCTAAGCTTGACAAGACACTTTTGAAGAAATATTTTGAAGAGCATCATCACGAGAACCTTCCAGATTTCTCTGATAAGTATGTTATCTTTCGTCGTGGCATTGGAATTGATCGAACAACTGACTACTTTGTCATGGAGAAAGTGGACATGCTCATTGGACGTTTATGGGCATATCTGTTAAGACTAACTAGGTTGGAGAAGCTTTTATCCAGAAGGTCAAAAAAGGGTAATAAGAAAGATCCAAATGACAATGAAATTAACTCTGAAACAAACGGGGACGAATTTTATGTTGAACGGATACGTCTTGAAAATATGCAACTAAGCTTCCATAATTTGATCGGCAAGACATTGATCCAAGAACCGACATTTGATCGGATAATTGTTGTTTACAGGAGAGCTAGCGCCAAATCAAAAGCAGAACGAGGAATATTTGTAAAGCATTTCAAAAACATTCCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAACCCTGGATTAACTCCAATGGACTGGGTTAAGTTTCTTGGGTCAGCAATAGTTGGGCTGGTTGCTGTAGTTAGTTCACTTGAAATGCCCACAGCTGATTGGTGGGTGATCTTTGCTGTTGTGTCCACAGTAATTGGTTATTGTGCTAAGACATACTTCACGTTCCAAGCAAACTTGGCTCAATACCAAAATTTGATTACACAATCAATGTATGACAAACAACTGGACAGCGGAAAGGGTACACTTCTCCATTTGTGTGATGATGTCATTCAACAGGAAGTCAAAGAGGTAATACTTTCATTCTTTATTCTGATGGAACAAGGCAAAGCTACAAGACAGGATCTTGACCAATGGTGTGAGGAACTAATCAAAGAAGAGTTTGGGGAGGAATGTAATTTTGATGTGGATGATGCAGTTCATAAATTAGAGAAATTTGGAATTGTTAGTCGGGATTCTATTGGCCGGTATCAATGTGTTGGGCTGAAACGAGCTAACGAGATCATTGGCACCACCACTGAAGAGCTTGTCCTCAAGGCAAGGCAGGGAAACATTAATCCTTGA 1476 0.4031 MAQSDEKGRHKKEVIRLERESVIPIMKPRIIMTLANLIEHSSDRAEFLKLCKRVEYTIRAWYLLQFEDLMQLYSLFDPVHGAQKLEQQKLAPEEIDVLEQNFLTYLFQVMEKSNFKVVTDDEVEVAHSGQYLLNLPITVDESKLDKTLLKKYFEEHHHENLPDFSDKYVIFRRGIGIDRTTDYFVMEKVDMLIGRLWAYLLRLTRLEKLLSRRSKKGNKKDPNDNEINSETNGDEFYVERIRLENMQLSFHNLIGKTLIQEPTFDRIIVVYRRASAKSKAERGIFVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAIVGLVAVVSSLEMPTADWWVIFAVVSTVIGYCAKTYFTFQANLAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVILSFFILMEQGKATRQDLDQWCEELIKEEFGEECNFDVDDAVHKLEKFGIVSRDSIGRYQCVGLKRANEIIGTTTEELVLKARQGNINP* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1672 491 Pfam Protein of unknown function (DUF3754) 264 385 IPR022227 -
Lja1g1672 491 PANTHER AMINOPEPTIDASE (DUF3754) 9 489 - -
Lja1g1672 491 PANTHER AMINOPEPTIDASE 9 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1672 Lja-Chr1 18465112 18480631 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1672 - - gmx:100819645 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1672 1 18465112 18480631 Lja1g1672 1 18465112 18480631 ECH
Lja1g1672 1 18465112 18480631 Lja2g2943 2 50816871 50875186 PCT