Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2648 ATGCTCTGTCACTTAGAATCTGCCAAAACTCTGGAAGGCACGTTTGGTAAAGTTCATGAGAAACTGAGTGTTAGGAGCTGCAAGGATGGAAGCGCCATTAGTGATAAAAAGTCTAGTTCAGAACAAGACTACTTGCCGGTGAAGAGCTTGAAGGATGCCAAATTTGTTTTCTGCACAGAGACAGTGAAGATATGGAGAATTGCATTCCCTCTTGCATTGTCATCGCTATTCCAGTACCTCACTCTCTCCATAATTTCCATCTATGCTGGCCATCTTGGAGACCTTGAGCTTTCTTCCATCTCTGTTTACCATGGTGTCATAGCTTCCATCTATTTTGACTTGCTGTCTGGCATGTCAAATGCATTGGTGACACTTTGTGGTCAAGCTTTTGGAGCAGGGAAATTTCAACATGCTGGCATTTATCTCCAAAGGTCATGGATTATACAAATTGCCACTTGTGTAATCCTGTTGCCTATTTATGTGTTTGCCACTCCAATCCTAAAGCTTCTTGGCCAAGAAGAAGAAATAGCTGACCTTGCAGGCAAATACTCTATTAAAGTCATTCCTTACATGTTTTCCTATGCTATTGGTTTTCCCACCGTGAGATTTCTTCATGCCCAGAGCAAGGTTAATGTTATTGTGTCCATTGGAAATAATATCACTGGGGTAGGAATGTCTGTGGCTATGGTTATCTATGTCATTGGTTGGTGCAAGGAAGGGTGGACTGGGTTGTCTTGGATTGCATTTAGGGAGTTATGGCCATTTACTAAGCTAAGTCTTGCCTCATCTGTGATGGCTTGCTTAGGGCAATGGTATGTTACTTGTATTATGCTCTTTGCTGGTCAACTAGAGAATCCTGTTATTGCTGTTGGTTCATACTCTATTTGCTTCAATATTCTAAGTTGGTACTCCATGCTGCTCCTAGGAATAAGTACTGCAATAAGCCATTTTATACATTTGTTTATCTTGCTTGGCATGTCGCAACCAAGAGCAGCCAAGTACTCTTTCTTGGTGACAATGTTTCAGTCTATCCTACTTGGTTTCTGTTCCATGATCGTTATATTCTTGAGTAAACAAGACTTTGCCATCATCTTTACCAAGAGTGAGGAAATGATACACGCAGTAGTGGGTGATTTAGCATACCTTCTTGGACTAACCATGGTTCTTAATAGTGCTTCCCTGGTGATAACAGGTGTGGCCATTGGAAGTGGATGGCAAGTTATGGTTAGTTACATCAACTTGGCCTATTACATTGTTGGACTCCCTATTGGAATTTTTCTAGGTTTCAAGGAGCATTTAGGGGTCAAGGGTCTTTGGGGTGGCACAATGTGCGGTAGTATTCTTCAGATTTTTGTCCTCCTACTTATCATTTGGAAGACCAGCTGGACCAAGGAGGTAACCTACTAG 1407 0.4179 MLCHLESAKTLEGTFGKVHEKLSVRSCKDGSAISDKKSSSEQDYLPVKSLKDAKFVFCTETVKIWRIAFPLALSSLFQYLTLSIISIYAGHLGDLELSSISVYHGVIASIYFDLLSGMSNALVTLCGQAFGAGKFQHAGIYLQRSWIIQIATCVILLPIYVFATPILKLLGQEEEIADLAGKYSIKVIPYMFSYAIGFPTVRFLHAQSKVNVIVSIGNNITGVGMSVAMVIYVIGWCKEGWTGLSWIAFRELWPFTKLSLASSVMACLGQWYVTCIMLFAGQLENPVIAVGSYSICFNILSWYSMLLLGISTAISHFIHLFILLGMSQPRAAKYSFLVTMFQSILLGFCSMIVIFLSKQDFAIIFTKSEEMIHAVVGDLAYLLGLTMVLNSASLVITGVAIGSGWQVMVSYINLAYYIVGLPIGIFLGFKEHLGVKGLWGGTMCGSILQIFVLLLIIWKTSWTKEVTY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2648 468 PANTHER PROTEIN DETOXIFICATION 38 216 - -
Lja2g2648 468 PANTHER PROTEIN DETOXIFICATION 216 466 - -
Lja2g2648 468 Pfam MatE 263 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja2g2648 468 Pfam MatE 70 216 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja2g2648 468 PANTHER MULTIDRUG RESISTANCE PROTEIN 38 216 - -
Lja2g2648 468 PANTHER MULTIDRUG RESISTANCE PROTEIN 216 466 - -
Lja2g2648 468 CDD MATE_eukaryotic 60 466 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2648 Lja-Chr2 36923482 36931558 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2648 K03327 - gmx:100789611 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2648 2 36923482 36931558 Lja2g2648 2 36923482 36931558 ECH
Lja2g2648 2 36923482 36931558 Lja5g0658 5 5935228 5939420 PCT