Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2481 ATGCCCCAAAACGAATCCCACTGTCACCACAATGGTGAAACCACCCTCACCACAAGCTCAGCTCCATCTTCACAGCACTGCAACCCCGTTCTGACCCTTCACCTCAGGGAACCCCAAGACTCCATTTTGGTCCCCAATTCAGACACCCTTTTGGCCAAAACAATGGCTTCCACCACCTCCACTTCCACCGACCCTCTCCCTTCTTCATCCTCCGACGACGTTGCTGTCAAAGCCGTTAACAAACGCTACGAGGGTCTCGTCACTGTTCGTACCAAGGCGATCAAGGGTAAAGGGGCATGGTACTGGGCGCACTTGGAACCCCTTCTGGTTCGAAATCCCGACACGGGCATGCCCAAATCGGTGAAGCTCAAGTGCTCCCTCTGTGACTCTGTTTTCTCTGCTTCAAACCCTTCCAGAACCGCTTCTGAGCACTTGAAGCGTGGAACTTGCGCCAATTTCAGCTCCGGTTTGAAGCCCGGTTCGGTCCCTTCGCCGCTTCCCATCTCGTCGGTGTCCGGTTCGAACCGGAAGAGGAGTTCGCCGGAAATGGGGGGTGTTGGTTCACCTGTGGCTTCTTATCAAAACCATGCCTTGGCAATGGTTGAAATGGGGTACCCGCAGGTGCACGGTAACTCGGTGAGCCCGCACCAGCAGCATCATTTGGTGCTGTCTGGTGGGAAGGAAGATTTGTGTGCTTTGGCTATGTTTGAGGACAGTGTGAAGAAGCTCAAGAGTCCCAAGACTTCACCTGGTCCTGCTTTGAGTAAAGAACAGGTTAATTCTGCTTTGGAATTGCTTGCTGATTGGTTCTATGAGTGTTGTGGGTCTGTGTCTTTGTCTACTCTTGAGCACCGCAAGTTCCAAGCTTTTCTTGGTCAGGTGGGTTTGCCAACAACTCTGAAGCGTGAGATTTCAGGTCCTAGGCTTGATGCTAGGTTCAGTGAGGCCAAGGCTGAGTCTGAGGCCAAGGTAAGGGATGCAATGTTTTTTCAGGTGGCTAGTGATGGTTGGAAGAATAGGAATTGGTATAGCTTGTGTTGTGGTGGTGAGAGTCTGGTTAAGTTTATGGTGAATCTTCCTAATGGGACTAGTGTGTTCCAGAAGGCAGTGTCCACCGGGGGAGTGGTTTCATCCAAGTATGCGGAGGAGGTTTTGTGGGAATCGGTGACCGGTGTTAGCGGGAGCGTGGTGCAGAGGTGTGTGGGGATTGTTGCGGACAAGTTTAAGGCCAAGGCATTGAGGAACTTGGAGATTCAGAACCATTGGATGGTAAATACTTCTTGTCAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAACAAAGAGCTACCACTTTTCAGGGTTGTGACTGAGAATTGCCTAAAGGTTGCAAATTTTATAGACACTGAATCTCAGGTGAGGAATATTTTTCTCAAGTACCGGATGCAGGAGATGGACTATCCCGGGTTGCTTCGAGTCCCTCCACCGAAATGTGACCCTATGACAAACTTTGCATCTGTGTTTCCAATGCTGGAGGACATTTTGTCCTGTGCTAGAATCATCCAAATGGTAATGTTGGAGGACTCGTTTAAGGTAATGTGCATGGAGGATCCACTGGCCAGAGAAGTTGCTGGGATGGTTCAGAATGAGGAGTTTTGGAATGAACTAGAAGCAGTTTATTCACTTGTGAAGATTATCAAGGGAATGGTTCAGGACATGGAAGCTGAGAGGCCATTGATTGGTCGGTGCTTGCCTCTTTGGGAGGAGCTGAGAACCAAAGTGAAGGAGTGGTGTGGCAAGTACAATGTTATGGAAGGACCTGTTGATAAAATAGTTGAAAAAAGGTTCAGAAAAAACTATCACCCTGCTTGGTCAGCAGCATTTATTCTTGATCCACTTTACTTGATTAAAGACACAAGTGGAAAGTACCTTCCTCCATTCAAGTGTTTGACACGCGAGCAGGAGAAAGATGTGGATAAGTTATTGACTCGGCTAGCCTCAAGAGAAGAAGCTCATGTTGTGTTGATGGAGCTAATGAAATGGAGATCAGAAGGGCTTGATCCACTTTATGCACAGGCTGTTCAGATGAAACAAAGGGATCCGATGACCGGAAAGATGAAAGTTGCGAATCCACTGAGCAGTAGGCTTGTCTGGGAAACATGCTTGTGTGAGTTCAAATCACTGGGGAAGATTGCAGTGAGGCTCATTTTCCTGCATGCAACCTCATCTGGGTTTAAGAGTAATTGGTCTTTCATGAGGAAAATTTCTGCAAATAAACAACACTCGAGCGCTTCATTGGAAAGAGCTCAGAAAATGGTATACATTGCAGCTCATGCTAAGCTTGAAAGGAGAGATTTTTCCAGTGAGGAAGAGAAGGATGCAGAACTGTTTGCCATGAGTGGTAGTGAGGATGGCATGCTGGCTGAGGTCTATGCTGATGCAACCTTAGTGTAA 2436 0.4787 MPQNESHCHHNGETTLTTSSAPSSQHCNPVLTLHLREPQDSILVPNSDTLLAKTMASTTSTSTDPLPSSSSDDVAVKAVNKRYEGLVTVRTKAIKGKGAWYWAHLEPLLVRNPDTGMPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCANFSSGLKPGSVPSPLPISSVSGSNRKRSSPEMGGVGSPVASYQNHALAMVEMGYPQVHGNSVSPHQQHHLVLSGGKEDLCALAMFEDSVKKLKSPKTSPGPALSKEQVNSALELLADWFYECCGSVSLSTLEHRKFQAFLGQVGLPTTLKREISGPRLDARFSEAKAESEAKVRDAMFFQVASDGWKNRNWYSLCCGGESLVKFMVNLPNGTSVFQKAVSTGGVVSSKYAEEVLWESVTGVSGSVVQRCVGIVADKFKAKALRNLEIQNHWMVNTSCQLQGFISLIKDFNKELPLFRVVTENCLKVANFIDTESQVRNIFLKYRMQEMDYPGLLRVPPPKCDPMTNFASVFPMLEDILSCARIIQMVMLEDSFKVMCMEDPLAREVAGMVQNEEFWNELEAVYSLVKIIKGMVQDMEAERPLIGRCLPLWEELRTKVKEWCGKYNVMEGPVDKIVEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPMTGKMKVANPLSSRLVWETCLCEFKSLGKIAVRLIFLHATSSGFKSNWSFMRKISANKQHSSASLERAQKMVYIAAHAKLERRDFSSEEEKDAELFAMSGSEDGMLAEVYADATLV* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2481 811 MobiDBLite consensus disorder prediction 161 181 - -
Lja2g2481 811 PANTHER PUTATIVE ISOFORM 1-RELATED 65 807 - -
Lja2g2481 811 MobiDBLite consensus disorder prediction 1 27 - -
Lja2g2481 811 MobiDBLite consensus disorder prediction 161 188 - -
Lja2g2481 811 PANTHER OSJNBA0013A04.12 PROTEIN 65 807 - -
Lja2g2481 811 SUPERFAMILY Ribonuclease H-like 399 776 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2481 Lja-Chr2 31644728 31647620 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2481 - - cam:101508329 1298.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2481 2 31644728 31647620 Lja2g0066 2 508767 511728 ECH
Lja2g2481 2 31644728 31647620 Lja2g2481 2 31644728 31647620 ECH