Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0066 ATGCTTCTTCATTGGAGGCCAGACGGCAACGAAGAAGAACAAGAACATGTAATCAAACAAACACAAGAAGAGTTTCCAATTTCCATCACCAGTCACACTCATAACTCTGTTTCTGCTTCTTCTCTACTTGCAATGGCGGCTACTGCACCTTCTGCTGACTCAGCTTCAGCCGATGAACTCACTGTAAAAGCTGTACAGAAGCGCTACGATGGTTTGGTCACGGTTCGAACCAAAGCTGTGAAGGGTAAAGGGGCTTGGTACTGGGCGCACCTTGAACCCATGCTGGTTCACAACGCCGATACAGGGCTACCCAAAGCGGTGAAGCTCAAGTGCTCTCTCTGCGACGCCGTATTCTCCGCTTCCAACCCCTCTCGCACCGCCTCTGAGCATCTTAAGCGCGGAACCTGCCCCAATTTCCACTCCGCAGCCAAACCCATATCCTCTGTATCTCCTGGCGGCGCTACTGTCTCGTCGCCTCCTTCTCCGGCGAACCACAGTCAGCGGAAGAGAACCTGCTCTGCGGGCCCTACCTCATCGTACCACGTCCCGCCGCTGGTGGATCCGTGCTTGGAGCTCGCGTACGCGCCGGCGAGTTTGCTTCCTCCGCAGCAGCAACCGCATTTGATGCTGTCCGGTGGGAAGGACGATTTGGGAGCTCTGGCGATGTTGGAAGACAGTGTGAAGAAGCTGAAGAGTCCTAAAACTTCTCCGGGGACATCTCTGAGCAAAATCCAAGTCGACACCGCGTTTGATTATCTCGCTGACTGGGTTTACGAGTCTTACGGCTCGGTTTCTTTCTCCGGTTTGGAGCACCCTAAGTTCAGAGCATTCCTGAACCAGGTTGGTTTGCCGCCGGTGTCTCGCCGAGACTTCACCGGTTCCAGATTGGATACCAGGTTCGAGGAAGCCAAGGCAGATTCAGAAGCTCGAATCAGAGACGCCATGTTCTTCCAAATAGCCTCTGATGGCTGGAAACAGAGGAATCACGGTGAAGAAAAGCTGGTTAACATGACTGTGAATCTCCCTAATGGAACCATTTTGTACAGAAGAGCAGTGTTTGTTCCTGGTTCTGCTCCTTCCAATTATGCAGAAGATGTTTTGTGGGAGACAATCACTGGCATTTGCGGGAATGTCCTGCAACAATGTGTTGGGATAGTTGCAGACAAGTTCAATGCTAAGGCTTTGAGAAACTTGGAGAATCAGAATCATTGGATGGTTAATCTCTCTTGCCAGTACCAAGGCTTCATTAGTTTAATCAAGGACTTCACCAAAGAAATCCCCTTGTTCACCACCGTGTCTGAGAGTTGTTTTAAGCTCGCGAATTTCATCAATTACAAATCTCAACTAGTTCGGAATAGTTTTCACAAGTATCAAATGCAAGAGCACGGGCACGCGTGGCTAATCAGAATGCACTCTTTTGAGGACTTCAACTTTGGTTCTGTGTATACAATGATGGAGGACATTTTGAGCTCAGCTCGTGCTTTAGAGCATGTTCTGCTTGATGAACCGTTCAAGATTGCTTCGATTAAAGACGCGAGCGCGAGAGAAGTTGGGGATATAATTCGAGACGTGGGGTTCTGGAATGATCTTGAAGCAGCCCACTCGTTGATTAAACTGGTGAAGGACATGGTTTGTGAGATTGAGACAGAAAGGCCACTTGTTGGACAATGTCTTCCCTTGTGGGATGAATTGAGAGCAAAAGTGAAGATTTGGTGCTCCAAATTTCAATTTTCAGAAGCATTGTTGGAGAAAGTTATTGAGAAACGGTTCAGGAAAAACTACCACCCTGCATGGGCTGCTGCATACATTCTTGACCCACTTTATCTGGTGAGGGACACCAGCGGCAAGTACCTTCCGCCATACAAGTTTTTGGCGCCGGAGCAGGAGAAGGACGTGGACAAGCTCATAACGAGGCTTGTCTCACGAGATGAGGCGCACGTTGTGTTAATGGAGCTCATGAAATGGAGAACACAAGGGCTTGATCCTGTGTACGCGCGAGCCGTGCAGATGAAGGAGAGAGATCCTGTAACTGGAAAGATGAGGATTGTGAATCCACAAAGCAGTAGGCTTGTTTGGGAGACTTATTTAACAGAATTCAGGTCCTTAGGGAGGGTTGCAGTGAGGTTAATATTCCTACATGCAACCTCGCGTGGCTTCAAATGCAATTGGCCTTTGCGGTTAGGACACTCCAGGGTAGCACTGGAGAGGGCGCAGAAGTTGATATTTATCGCAGCTCATTCGAAATTGGAAAGGAGGGATTTTTCCAGTGATGAAGATAAGGATGCAGAGCTGTTTGCCTTGGTCAATGGTGAGGATGATGTGTTGAATGAGGTCTTTTTGGATACATCCTCAGTGTAA 2358 0.4873 MLLHWRPDGNEEEQEHVIKQTQEEFPISITSHTHNSVSASSLLAMAATAPSADSASADELTVKAVQKRYDGLVTVRTKAVKGKGAWYWAHLEPMLVHNADTGLPKAVKLKCSLCDAVFSASNPSRTASEHLKRGTCPNFHSAAKPISSVSPGGATVSSPPSPANHSQRKRTCSAGPTSSYHVPPLVDPCLELAYAPASLLPPQQQPHLMLSGGKDDLGALAMLEDSVKKLKSPKTSPGTSLSKIQVDTAFDYLADWVYESYGSVSFSGLEHPKFRAFLNQVGLPPVSRRDFTGSRLDTRFEEAKADSEARIRDAMFFQIASDGWKQRNHGEEKLVNMTVNLPNGTILYRRAVFVPGSAPSNYAEDVLWETITGICGNVLQQCVGIVADKFNAKALRNLENQNHWMVNLSCQYQGFISLIKDFTKEIPLFTTVSESCFKLANFINYKSQLVRNSFHKYQMQEHGHAWLIRMHSFEDFNFGSVYTMMEDILSSARALEHVLLDEPFKIASIKDASAREVGDIIRDVGFWNDLEAAHSLIKLVKDMVCEIETERPLVGQCLPLWDELRAKVKIWCSKFQFSEALLEKVIEKRFRKNYHPAWAAAYILDPLYLVRDTSGKYLPPYKFLAPEQEKDVDKLITRLVSRDEAHVVLMELMKWRTQGLDPVYARAVQMKERDPVTGKMRIVNPQSSRLVWETYLTEFRSLGRVAVRLIFLHATSRGFKCNWPLRLGHSRVALERAQKLIFIAAHSKLERRDFSSDEDKDAELFALVNGEDDVLNEVFLDTSSV* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0066 785 MobiDBLite consensus disorder prediction 142 178 - -
Lja2g0066 785 PANTHER F16P17.2 PROTEIN 50 781 - -
Lja2g0066 785 PANTHER OSJNBA0013A04.12 PROTEIN 50 781 - -
Lja2g0066 785 SUPERFAMILY Ribonuclease H-like 318 610 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0066 Lja-Chr2 508767 511728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0066 - - qsu:111999468 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2481 2 31644728 31647620 Lja2g0066 2 508767 511728 ECH
Lja2g0066 2 508767 511728 Lja2g0066 2 508767 511728 ECH