Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2145 ATGTCACTCCCCGGTAACAACGCCTCCGGCGATCGCGTTGACGGTAACGGCACCGTACCTCCGCCGGGGTTCACGACGGCGCCGTCGAGCCAGAGGCTGCGGCTGAACCCGAACAAGGAGCACAAGCCAGATGGGTACGAGGACCTGGAATTGGATTTCAGCCCTTCGATCTTCAGCTCCCTTGAGATGTACCTTCCTCCCAACATGCTCGCTGTTCCTCGTGATGACAAGGCCAAGTTCATGCACGAGATTTTGCTCAAGTACCTTCCTCTTGCGGAGCGTACCAGAGGTCAGAAACAAAAAGAGTACAGACACCAGATACTATCAAATTATCAACCTAAACATGAGGAGTTGTACATCATGAATCCTACTACATTCTTCGTTCCAGCATTTTTGAGAGCAATTAACGATAACACAGAGCAAAGCTTTAGAAGTATAATGTCTGAGCCTTCTCCAGGCATTTTTACATTTGAAATATTTCAAAAAGACTTTTGTCAGTTATTGCTATCTGAGCTGGAGAATTTTGAGAAATGGGTGACTGAAACAAAATTTCGGATCATGCGTCCCAATACAATGAACAAATATGGTGCTGTACTCGATGATTTTGGCCTTGAGACGATGCTTGACAGGCTTATGGATGGTTTTATTCGTCCTTTATCGAAAGTCCTCTTTGCAGAAGTTGGTGGAGCAACCCTGGATTCTCATCATGGATTTGTTGTTGAATATGGTAACGATAGAGATGTTGACTTGGGTTTCCATGTGGATGACTCGGAAGTAACCTTGAATGTTTGCTTGGGTAAAGAATTTTCTGGAGGAGAGTTGTTTTTCCGGGGCACACGATGTGAGAAACATGTAAATACTGGAACTCAATCTGAGGAGTATTTTGATTATTCCCATGTACCTGGACGTGCTGTGCTTCACCGCGGGCGTCATCGCCATGGTGCTAGAGCTACAACATCTGGCCATCGGGTCAACTTACTTCTGTGGTGTCGAAGTTCTGTCTTTAGAGAACTGAAACGGTATCAGAGTGATTTCCCCAGCTGGTGTGGAGAGTGCCATCATTTGAAAAAGGAGAGGCAGCGCTCCACAATTGCTGCTACGAAAAAGGAATTGTTCAGAAGGGAAGGTGGATCGGCTTTATAA 1143 0.4593 MSLPGNNASGDRVDGNGTVPPPGFTTAPSSQRLRLNPNKEHKPDGYEDLELDFSPSIFSSLEMYLPPNMLAVPRDDKAKFMHEILLKYLPLAERTRGQKQKEYRHQILSNYQPKHEELYIMNPTTFFVPAFLRAINDNTEQSFRSIMSEPSPGIFTFEIFQKDFCQLLLSELENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLETMLDRLMDGFIRPLSKVLFAEVGGATLDSHHGFVVEYGNDRDVDLGFHVDDSEVTLNVCLGKEFSGGELFFRGTRCEKHVNTGTQSEEYFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFRELKRYQSDFPSWCGECHHLKKERQRSTIAATKKELFRREGGSAL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2145 380 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 14 377 - -
Lja2g2145 380 SMART p4hc 152 331 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lja2g2145 380 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 233 332 IPR005123 -
Lja2g2145 380 Gene3D q2cbj1_9rhob like domain 154 332 - -
Lja2g2145 380 MobiDBLite consensus disorder prediction 1 45 - -
Lja2g2145 380 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 14 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2145 Lja-Chr2 24206149 24214204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2145 - - gmx:100816390 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2145 2 24206149 24214204 Lja4g0054 4 440193 446669 ECH
Lja2g2145 2 24206149 24214204 Lja2g2145 2 24206149 24214204 ECH
Lja4g0054 4 440193 446669 Lja2g2145 2 24206149 24214204 PCT