Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1196 ATGTGGACTGGATTAGTGAAAAAGTTAGCTTCATCCACAATGGGAAGCTGTGCCTCAAGGCCAAATGGGAAGAGCAGTGGCCAAAGAAGAAGAAAGCACAAATCTGGCAAACGCAGAGCAAACATTTCCACTGCACTTCCTGATATGCCTTTGAAAAGGCTTAGCAATGCTGGAAGCCGTGTTGGAGACCTTACTATGAGTGACTTTGTTCACATGGACTTTGACAAGGGTGCTTCAGGCACTTGCAGGATTTCAGAGGTTTCAAACATGAAGTTTCATCTTACTCAGGTCCAATACCATAGTCAAATGGATGCAAATGGAAATTACCAAGAGGATGCATGGTTTGACTCAACTAGCATTCTAGAATCTGATTCAGATGAAGAGTTCAGTAGTGTGCATGGAGATTGTTTTCCCTTTGTGGGCAATGCTTTGGGAGGTGTCTCAAATACTCAGTTACTCCAGTATGAAAGTGCATCCTGCTTTGTAGATTCAGGGTGTAAATATGAGGAGTATTATGAGAGCTACCTCAAAATAGATGGAGGTATCTGCAAGAATGGAGAGAAAACTCAGGAGAATAGCTCAAAGCAATCAACAGTTATCATGTATTCTGTAACAAGGAAATCCACTGATGATGCATCTGAGAGATTTCTATATCGTCCCAGAGCTGGGCTTCAAATTCCCAGATCAACTGAAGGAAAGCCGTTCGCTGGTTCCTGGTCTGCAATTTCCCCTTCCTTGTTCAAGCTCCGTGGCGAAAGTTTTTTCAGTGATAAGCAGAAGTGTCCTGCTCCAGACTTCTGCCCTTATACACCAATAGGTGTTGATTTATTTGTTTCTTCAAAGAAGATAAATCACATTGCTAAGCATCTTGAACTTCCATCTGTTCAAGAACATGGGAAAATACCCTCACTCCTCATTGTTAATATACAGTTGCCAACATATCCTGCTAGCATATTCCTTGGTGATGCCAATGGTGAAGGTTTGAGCCTTGTACTATATTTTAAATTGTCCGAGAATTTTGAAAAAGAGATCTCGCCATGTTTTCAGGAGAAGATCAAGAGATTAGTGGACGATGAGATGGAAAATGTGAAAGGAAAAAAGGATAGTCTGGCTCCCTTTAGGGAAAGGCTAAAGATTTTGGCTGGGGTAGTTAATCCAGAGGACCTTCATCTGAATTCTGCAGAGAGGAAACTTATACATGCCTACAATGGAAAGCCAGTGCTTTCTCGTCCTCAACACGAATTCTTTAAGGGACCTAACTACTTTGAGATAGACCTGGATATACATCGCTTTAGCTATATATCGAGGAGGGGACTCGATTCGCTCCGAGACCGTGTAAAGCATGGAATACTTGATGTTGGCTTAACCATCCAGGCACAGAAGCAAGAGGAACTTCCAGAGCAAGTGTTGTGCTGCTTAAGATTGAACAAAATTGATCTTGTTAACCATGGCCAAATTCCCACTATTGTGACTTTTCAAGAAAACTGA 1488 0.4187 MWTGLVKKLASSTMGSCASRPNGKSSGQRRRKHKSGKRRANISTALPDMPLKRLSNAGSRVGDLTMSDFVHMDFDKGASGTCRISEVSNMKFHLTQVQYHSQMDANGNYQEDAWFDSTSILESDSDEEFSSVHGDCFPFVGNALGGVSNTQLLQYESASCFVDSGCKYEEYYESYLKIDGGICKNGEKTQENSSKQSTVIMYSVTRKSTDDASERFLYRPRAGLQIPRSTEGKPFAGSWSAISPSLFKLRGESFFSDKQKCPAPDFCPYTPIGVDLFVSSKKINHIAKHLELPSVQEHGKIPSLLIVNIQLPTYPASIFLGDANGEGLSLVLYFKLSENFEKEISPCFQEKIKRLVDDEMENVKGKKDSLAPFRERLKILAGVVNPEDLHLNSAERKLIHAYNGKPVLSRPQHEFFKGPNYFEIDLDIHRFSYISRRGLDSLRDRVKHGILDVGLTIQAQKQEELPEQVLCCLRLNKIDLVNHGQIPTIVTFQEN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1196 495 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 239 479 IPR009769 -
Lja2g1196 495 MobiDBLite consensus disorder prediction 25 39 - -
Lja2g1196 495 PANTHER CW14 PROTEIN 14 494 - -
Lja2g1196 495 MobiDBLite consensus disorder prediction 12 45 - -
Lja2g1196 495 PANTHER BNAC05G10210D PROTEIN 14 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1196 Lja-Chr2 11359321 11364730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1196 - - gmx:100794541 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1196 2 11359321 11364730 Lja2g1075 2 10262678 10267419 PCT