Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1075 ATGGGAGCGTGTGTGTCAACTCCACAAGGTTGTGTTGGGGGAAAGTTGAAGAGGAAAAAAAACCGCAAGAGGAGGAGAGGAGATGGGCTCAGGAGAAGAGTTTGTTGTCGGTTGTATAAGAAGGGGAAGGGATCATCATTGGACAAGGTTGATGTGCCCGGTGACCGTTCCTTTGCCAACAACCCCACTTTCCAAGCTGGAAGTATTATTGAGGAGGCATGGTTTGATTCAGTTGCGGTGTTTGAATCAGACTGTGATGATGATTACCAGAGTGTCCCTGATGATGTTGTATCTCTGAATGGGATAGAATCCATATCAAGTTTTGCATCTTCAAGAGATGGAAACCATAGAGTATCAACTGATCAAGTGCAGAAAACAAAGGAGTTGTTATCTAGAGAATATTCTGGAAATATCTCTGAGGCTGCCAGAATTTCAGATGTTCAACATTCTAGTGTAGATGTCATTGATTCTCAATGTAAATGCGACAGAAATATAGTTGAAGGAAATGAACCTGTGTTCCTTGATGAAATCTCCTCAGTGGATGCAAATTCCATCAAGGAAGATGGAATTTTGGATAACTGTGGGATTCTTCCGAATAATTGTTTGCCTTGTCTTGCATCTACTGTTCCTTCCATTGAAAAGAGAAGATCATCAAGTTCTAGTCCTCCTAGTGCAAGGAAGAAGACTCCTATGAAAATCTCCTCTAAATTGAGGGAAGGACATGGGATTGCTACCCTATTTTCGTCAAAGGAACTTCTACAAAGACCAATTGCAGGTTCTCAAGTACCCTTTTGTCCAATTGAGAAGAAAATGCTTGATTGTTGGTCACACATTGATCCAAGCACTTTCAAAGTCCGAGGAGTAAATTATTTGAAGGACAGGAAGAAGGAATTTGCTCCTAACCATTCTGCATATTACCCATTTGGTGTAGATGTTTTCTTATCTCCGCGAAAAGTGGACCATATAGCTAGGTTTGTGGAGCTTCCTGTTATTAGTTCCTCTGGGAAATTTCCACCCATACTTGTTGTGAATGTACAGATTCCTCTCTACCCTACCGGACTGTTTCAAGGTGAAACTGATGGCGAAGGAATGAGTTTTGTTTTGTATTTTAAACTTTCAGAAAGTTACTCCAAGGAACTTCCACTGCATTTTCAAGAAAGCATGAGGAGGTTGATGGATGATGAAGTTGAGAAGGTAAAGGGTTTTCCTGTAGATTCAATTGTTCCCTTCCGTGAAAGGTTGAAAATCTTGGGCCGTGTTGTCAATCTGGAAGATCTTCATTTAAGTGCAGCTGAAAGGAAGCTTATGACCGCTTACAATGAGAAACCTGTTCTTTCACGTCCCCAACATGAGTTTTACTCGGGAGAAAACTACTTTGAGATTGATATAGATATGCATAGATTCAGTTATATCTCCAGGAAAGGGTTTGAAGCTTTCTTGGACAGATTAAAAGTCTGTGTTCTAGATGTTGGTTTAACAATTCAGGGGAACAAACCAGAGGAGCTGCCAGAGCAATTGTTATGTTGTATTAGGCTAAATGCCATTGACTACATGAATTACCAACAACTTGGGCTAACTCAAGAAGAACCCCTGTAA 1596 0.4073 MGACVSTPQGCVGGKLKRKKNRKRRRGDGLRRRVCCRLYKKGKGSSLDKVDVPGDRSFANNPTFQAGSIIEEAWFDSVAVFESDCDDDYQSVPDDVVSLNGIESISSFASSRDGNHRVSTDQVQKTKELLSREYSGNISEAARISDVQHSSVDVIDSQCKCDRNIVEGNEPVFLDEISSVDANSIKEDGILDNCGILPNNCLPCLASTVPSIEKRRSSSSSPPSARKKTPMKISSKLREGHGIATLFSSKELLQRPIAGSQVPFCPIEKKMLDCWSHIDPSTFKVRGVNYLKDRKKEFAPNHSAYYPFGVDVFLSPRKVDHIARFVELPVISSSGKFPPILVVNVQIPLYPTGLFQGETDGEGMSFVLYFKLSESYSKELPLHFQESMRRLMDDEVEKVKGFPVDSIVPFRERLKILGRVVNLEDLHLSAAERKLMTAYNEKPVLSRPQHEFYSGENYFEIDIDMHRFSYISRKGFEAFLDRLKVCVLDVGLTIQGNKPEELPEQLLCCIRLNAIDYMNYQQLGLTQEEPL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1075 531 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 275 516 IPR009769 -
Lja2g1075 531 PANTHER - 1 528 - -
Lja2g1075 531 MobiDBLite consensus disorder prediction 213 228 - -
Lja2g1075 531 MobiDBLite consensus disorder prediction 213 232 - -
Lja2g1075 531 PANTHER CW14 PROTEIN 1 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1075 Lja-Chr2 10262678 10267419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1075 - - aprc:113869019 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1075 2 10262678 10267419 Lja2g1075 2 10262678 10267419 ECH
Lja2g1196 2 11359321 11364730 Lja2g1075 2 10262678 10267419 PCT