Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0975 ATGGCTGGGGCATTAAAAAAGTGCATGATGCTTTGTTGTACAAGCAAGATTGTCTCGAAGGAAGAAATGGCAGGAGAATCATACGATGAAGCAATCGCATCGCTGACCAAGCTTCTCAGCGAGAAAGCTGACCTCGGGGCGGTCGCCGCCGCAAAGATCAAGGACCTCACGGCGGAGTTAGAAGACGCCGGTTCGAAGCCGTTCAACCCGGATGAGAGGATCCGAACCGGGTTCGTCCAATTCAAGAGCGAGAAATTTGAGAAGAATCCAGATCTGTACGGTGAACTTGCCAAAGGCCAGAGCCCAAAGTTTTTGGTATTTGCATGTTCAGACTCAAGAGTTTGCCCATCCCATATTCTGAATTTTCAACCGGGTGAAGCCTTCATGGTCCGCAACATCGCCAACATGGTTCCACCATTTGACAAGACAAAGTATTCGGGAGCAGGGGCGGCCATTGAATATGCAGTACTGCATTTAAAGGTGGAGAATATTGTAGTTATTGGACATAGCTGCTGTGGAGGAATAAAGGGGCTCATGTCTATCCCAGACGATGGGACCACTGCAAGTGACTTCATAGAGCAATGGGTCCAAATATGCAACCCAGCAAAGTCCAAGGTTAAAACGGATACAGGCAGCTTAAGTTTCTCAGAACAGTGTACTAACTGTGAGAAGGAAGCTGTGAATGTCTCACTAGGAAACCTATTGACTTATCCATTTGTGAAAGAAAGAGTTCTAGACAAAACGCTTGCATTGAAAGGAGCACATTACAATTTTGTTACTGGCAATTTTGAGCTGTGGGATCTGAACTTCAAAGTTCAGCCTTCTATATCCGTTTAA 837 0.46 MAGALKKCMMLCCTSKIVSKEEMAGESYDEAIASLTKLLSEKADLGAVAAAKIKDLTAELEDAGSKPFNPDERIRTGFVQFKSEKFEKNPDLYGELAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPFDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICNPAKSKVKTDTGSLSFSEQCTNCEKEAVNVSLGNLLTYPFVKERVLDKTLALKGAHYNFVTGNFELWDLNFKVQPSISV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0975 278 CDD beta_CA_cladeB 77 266 IPR045066 GO:0004089|GO:0008270
Lja2g0975 278 SMART Pro_CA_2 97 267 IPR001765 GO:0004089|GO:0008270
Lja2g0975 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 153 173 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lja2g0975 278 Pfam Carbonic anhydrase 105 262 IPR001765 GO:0004089|GO:0008270
Lja2g0975 278 PANTHER CARBONIC ANHYDRASE 23 278 IPR001765 GO:0004089|GO:0008270
Lja2g0975 278 PANTHER CARBONIC ANHYDRASE 23 278 - -
Lja2g0975 278 SUPERFAMILY beta-carbonic anhydrase, cab 72 274 IPR036874 GO:0004089|GO:0008270
Lja2g0975 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lja2g0975 278 Gene3D Carbonic anhydrase 63 278 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0975 Lja-Chr2 9147559 9156616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0975 K01673 - gmx:100803945 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0975 2 9147559 9156616 Lja2g0975 2 9147559 9156616 ECH
Lja2g0975 2 9147559 9156616 Lja2g1744 2 17542227 17546325 ECH