Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0955 ATGGACTCCAACAAGAAGCTACCATTCTCAGAGCCATTTCTCTCTCAGAGGAGAAAGGTCTTGTCCGGTTTCAGTTTAGGCATTGGTGCTTCTCTCCTCTTCCTCACTCTTCTCTTCCTCAATCCTTCCTTCAAGGTTCCCAATGTCCAAGTCCTTCTCCAAGGATCTGATCAAAACTCTTCCTCTTCTTCCTGGCATTTCCCCTTTTCCACCTCCCCTTCGAGCAACGCTTCCGTGAGTTCTCTGCAGAGAAAAAGTGAAGTGAATGTGTCAGTGGAGGCTTTGGAGAAAACCCATCTCGGGAATCTGAATAACCATCGTGGAAATGCAAGCTTGCATGCTGAAGAACAAGGGTTTCCACCGGAAACAGGTGCATTGGTCGCTGGAAAAGAGAATTTCTCGGATCCTAATGGGGTGGCTAAAGATGGAGGAGCCTTGCTCGGTGGGAAAAGAGAAATTGCTGCGAATTTAAGCGTGTCGGTTGAAGTGAACACCGACACGGTGATGCAGAAAACTATGGAAGGAGGGTTACAGAAGGAAAACAACAATATGGGAAATTCGTCGTTGGATGGAAATGCTGTGGAGGGAAAGAATGAAGGGGAGTTGATGAAGAAAATGCAGGATGGTTTCCTCGGAAATTGTGACATATTTGATGGAAGTTGGGTTAGAGATGATGATTCAAAGCCATACTACCCATTGGGTTCTTGTCCTCATGTGGATAGGGATTTTGATTGTCATCTTAATGGGAGGCCTGACAGTGAATATGTGAATTGGAAATGGAAGCCAAATGGGTGTGACATTCCAAGTTTGAATGCAACTGATTTTCTGGAAAAGTTGCGAGGACAGAAGCTGGTTTTTGTGGGGGATTCACTGAACAGGAACATGTGGGAGTCCATGGTGTGTATTCTATGGCAAAGCATTAGGGACAAAAAACGTGTCTATGAAATTTCAGGGAGAACAGAATTTAAGAAGAAAGGTGTTTATGCTTTTATGTTTGAGGATTATAATTGTTCTGTGGATTTTGTTAGCTCACCGTTTATTGTTCAAGAGTCAACTTTCAAAGGCAAAAATGGGTCATTTGAGACCTTAAGGTTGGATTTGATGGATCAGACAACTTCCATGTATCATGATGCTGATATAATAGTCTTCAATACAGGCCACTGGTGGACCCATGAGAAAACATCGAAGGGAGAAGACTATTATCAAGAAGGTAACCATGTCTACCCAAGACTCAAAGTTCTGGATGCATTTACTAGGGCATTGACCACTTGGGCTAAGTGGATTGACAACAATATCGATGCCAATCGAACTCAGGTTTTCTTCAGAGGATACTCAGTTACCCATTTCAGGGGTGGGCAATGGAATTCAGGAGGACAGTGCCACAAAGAAACCGAGCCAATAATGAATGGAACTCACTTAAGGAAATACCCCTCGAAAATGAGGGCTTTAGACCATGTCATCCCAAAGATGAAAACCCCTGTAATATATATGAACATAAGTAGGATGACAGATTACAGGAAAGATGGACATCCTTCTATATACAGAATGGAATACAAGACTGCTGCAGAACGCGCTTCTGCAGAGCTACACCAAGATTGTAGTCATTGGTGCTTGCCTGGAGTACCTGACACTTGGAATCAACTACTCTATGCTTCTCTGTTAAAACATGGTAAAGGCAATTGGAAAAGCTGA 1692 0.432 MDSNKKLPFSEPFLSQRRKVLSGFSLGIGASLLFLTLLFLNPSFKVPNVQVLLQGSDQNSSSSSWHFPFSTSPSSNASVSSLQRKSEVNVSVEALEKTHLGNLNNHRGNASLHAEEQGFPPETGALVAGKENFSDPNGVAKDGGALLGGKREIAANLSVSVEVNTDTVMQKTMEGGLQKENNNMGNSSLDGNAVEGKNEGELMKKMQDGFLGNCDIFDGSWVRDDDSKPYYPLGSCPHVDRDFDCHLNGRPDSEYVNWKWKPNGCDIPSLNATDFLEKLRGQKLVFVGDSLNRNMWESMVCILWQSIRDKKRVYEISGRTEFKKKGVYAFMFEDYNCSVDFVSSPFIVQESTFKGKNGSFETLRLDLMDQTTSMYHDADIIVFNTGHWWTHEKTSKGEDYYQEGNHVYPRLKVLDAFTRALTTWAKWIDNNIDANRTQVFFRGYSVTHFRGGQWNSGGQCHKETEPIMNGTHLRKYPSKMRALDHVIPKMKTPVIYMNISRMTDYRKDGHPSIYRMEYKTAAERASAELHQDCSHWCLPGVPDTWNQLLYASLLKHGKGNWKS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0955 563 Pfam PMR5 N terminal Domain 213 266 IPR025846 -
Lja2g0955 563 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 267 551 IPR026057 GO:0016740
Lja2g0955 563 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 11 561 - -
Lja2g0955 563 MobiDBLite consensus disorder prediction 113 134 - -
Lja2g0955 563 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 561 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0955 Lja-Chr2 8996679 9002330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0955 - - lja:Lj2g3v1415120.1 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0955 2 8996679 9002330 Lja2g0955 2 8996679 9002330 ECH
Lja4g2377 4 26586722 26591053 Lja2g0955 2 8996679 9002330 PCT