Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja2g0466 | ATGGGATCGTCATGGACTACAAGGCAGAACAAACTATTTGAAGATGCACTAGCAATATATGACAGGGAAACCCCTGATAGGTGGCAGAATATCGCCAAACTGGTGGGAAAATCCGTTGAGGAGGTTAAAAGGCACTACGAAATCCTTGTAGAAGATGTCAAGCGCATTGAGCGTGGTCAGGTCCCTTTTCCTTACAAAGGTACCTCTTAA | 210 | 0.4476 | MGSSWTTRQNKLFEDALAIYDRETPDRWQNIAKLVGKSVEEVKRHYEILVEDVKRIERGQVPFPYKGTS* | 70 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja2g0466 | 69 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 67 | - | - | |
| Lja2g0466 | 69 | ProSiteProfiles | SANT domain profile. | 1 | 54 | IPR017884 | - | |
| Lja2g0466 | 69 | SUPERFAMILY | Homeodomain-like | 3 | 57 | IPR009057 | - | |
| Lja2g0466 | 69 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 1 | 67 | IPR044636 | GO:0003700 | |
| Lja2g0466 | 69 | Gene3D | - | 1 | 63 | - | - | |
| Lja2g0466 | 69 | CDD | SANT | 4 | 46 | IPR001005 | - | |
| Lja2g0466 | 69 | SMART | sant | 1 | 52 | IPR001005 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja2g0466 | Lja-Chr2 | 4255610 | 4256675 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja2g0466 | - | - | lja:Lj4g3v0973380.1 | 117.857 |
Event-related genes