Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5981 ATGGCTATCTCTTCCACTGCCACATCCCTCAAATCATTAACCCCTCAAACCCACTCCCTCATTCCCTCTTCCACCAAACTCAACCAATCTCCATTCTCCAGGCCCAAGCCCAAACCCGGGCCCAATTCCTCCATCTTCGCCGTCCACGCCGCCGAGCCTGCAAAAAACCCCGTCGTCTCCACCGACAAGCCGCAGATTCCACCGCAACCCACCGCCTCCACCGCCGTCCGAAATGCCGGGACCGGTAAATGGACCGTTGAGAGCTGGAAATCGAAGAAGGCTTTGCAGCTACCTGAGTACCCGAGCCAGGAGGAGCTTGACGCCGTGCTCCAAACCCTCGACGCGTTCCCGCCGATCGTGTTCGCCGGAGAAGCCCGGACGCTTGAGGATCATCTCGCACAGGCCGCCATGGGAAACGCTTTCCTCCTTCAGGGTGGTGACTGCGCTGAGAGCTTCAAGGAGTTCAATGCCAACAACATTCGTGACACGTTCCGTATCATTCTTCAGATGAGTGTTGTCATGATGTTCGGTGGCCAAATGCCTGTCATCAAGGTTGGAAGAATGGCGGGTCAATTTGCGAAGCCGAGATCGGATTCGTTTGAGGAGAAGAATGGTGTGAAGCTTCCGAGTTACAGGGGAGATAACATCAATGGGGATACGTTTGATCTGAAGTCAAGGACTCCGGATCCACAGAGGATGATCAGGGCTTATTGCCAAGCTGCGGCGACGCTCAATCTTCTCAGAGCTTTTGCCACTGGAGGGTATGCTGCTATGCAGAGGGTTACTCAATGGAATCTGGACTTCACTCAGCAGAGTGAGCAGGGAGATAGGTACCGAGAGCTTGCTAACCGAGTTGATGAGGCCCTTGGGTTCATGGCTGCTGCTGGGCTCACAGTGGACCATCCCATAATGAAAACAACTGATTTCTGGACATCTCATGAATGCTTGTTATTGCCATATGAACAATCCCTTACTAGGTTGGATTCAACATCTGGTCTCTACTATGATTGTTCAGCCCACATGATTTGGGTTGGGGAGCGAACCAGGCAGCTGGATGGTGCCCATGTTGAGTTTCTTAGAGGAGTTGCTAATCCCTTGGGAATTAAGGTAAGTGACAAGATGGATCCAAATGAGCTTGTCAAACTCATTGAGATCTTGAATCCCCAAAACAAAGCAGGGAGAATAACAATAATCACGAGGATGGGAGCTGAGAACATGAGAGTGAAGCTTCCACATTTGATTAGGGCAGTGCGCAGAGCAGGACAAATTGTCACATGGGTCAGCGATCCTATGCACGGAAATACCATTAAGGCTCCATGTGGTCTCAAAACTCGTCCCTTCGATGCCATCAGGGCTGAAGTGCGAGCATTCTTTGATGTGCATGAACAAGAAGGAAGCCACCCGGGTGGAGTTCATCTAGAGATGACGGGTCAGAACGTGACTGAGTGCATTGGTGGGTCGAGAACAGTCACCTTCGATGACCTGAGCTCACGTTACCACACACACTGCGACCCAAGGCTCAATGCTTCTCAATCTCTTGAGCTTGCTTTCATCATCGCTGAACGGCTAAGAAAGACTAGGATCAAGACACAGCAACCTCTTGCCCCTTTAGGACTGTGA 1620 0.5148 MAISSTATSLKSLTPQTHSLIPSSTKLNQSPFSRPKPKPGPNSSIFAVHAAEPAKNPVVSTDKPQIPPQPTASTAVRNAGTGKWTVESWKSKKALQLPEYPSQEELDAVLQTLDAFPPIVFAGEARTLEDHLAQAAMGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNINGDTFDLKSRTPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTQQSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTDFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKTRIKTQQPLAPLGL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5981 539 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 4 535 - -
Lja1g5981 539 Pfam Class-II DAHP synthetase family 84 520 IPR002480 GO:0003849|GO:0009073
Lja1g5981 539 MobiDBLite consensus disorder prediction 1 79 - -
Lja1g5981 539 MobiDBLite consensus disorder prediction 65 79 - -
Lja1g5981 539 SUPERFAMILY Aldolase 79 524 - -
Lja1g5981 539 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 84 526 IPR002480 GO:0003849|GO:0009073
Lja1g5981 539 MobiDBLite consensus disorder prediction 1 32 - -
Lja1g5981 539 Gene3D Aldolase class I 267 525 IPR013785 -
Lja1g5981 539 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 4 535 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5981 Lja-Chr1 110238615 110242750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5981 K01626 - gmx:100797019 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5981 1 110238615 110242750 Lja1g5981 1 110238615 110242750 ECH
Lja1g5981 1 110238615 110242750 Lja1g5228 1 78245907 78249053 PCT