Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5920 ATGGATGAGGTCAAGTTTGACAATGAACAAGATTATGTGTCAGACAAAGTGAATTCTCATGCTGTTGAAAAGCTGGAAGGAGATGCTTTTACCATTCAAAATGAAGATCATAACAAGGAATCAAAGGATATGGAAATTCAACATGTTGACAAGATGGATGAGGTGAAGTTTGGCAATGAACAAGATGATGTGTCAGACAAAGTGAATTCTCATGCTGTTGAAAAGATGGAAGGAGATGCTTTTGCCATTCAAAATGAAGATCATAACAAGGAATCAAAGGATATGGAAATTCAACATGTTGGTTATGATGGCTCTGAGTTTGACAAAGAGCTAGATGATATATCAGACAAGATGGATGAGATGAAAGATGTAAAGTTGAGTACGCGCGAGGAGATGATAGACAATATGATTGGAGAATCTGAGTTCGCTCAGAGGGTAGATGAGAGTATGGATTTGCAGCGTGGACCTCAGGAAGAAAACTTGGAGGCTAGTAGTAGTATTGTTCCTGGTGAATCATTTCATGAGGTACTTGAGAGTATTTCCTTGAACTCTGAAATTCAAGCCAATGATGACAGAAAAGAGTATTCTGGTGCTAACATTGACAACAATGGAGATTTTGAGTCTAAAAGTCAAGAGGTGCATTTAGATAATAATTTCACACATAATGACATGGGTGAAGAGAATGATAACACTTCTAATGAGGATAGAAATTCAGAACTTGTATTTGATGGAAAAGAGGTTCTTGGTGTGGAAGCTAGTCAAGGGACACTTGCAGATGTTTTGTATGCTGAACCAGAGACTCCACGTGTGGTTGAGCGAGCTGTAGCTCTTACAAACTTTGTTAGGGTGAAAAGTGTGGCAGTAGTCTCCACTATGCTCCGTCGAATTTCTGGAAAAATAGGTGAAGATTCTGTGTGTAATTATGATGATGTAGGTAAGGATGTTTCAAATTTACACAGTGAGAGTGAACCCAAGGATGTTTCTAAAAAGGAAGTGGAGAAAGCAACTTTGAACCCCCTAAATCAGAGGGAGGATCCAATAAATGAAGGTCCACCAAAACCTATAGCCATGAAAGGACGTATTATATTGTACACAAGACTAGGGTGCCAAGAATCTAAAAAGGTTAGACAATTTTTGTATATGAAAAGACTTAGATATGTTGAGATCAACATTGATGTATACCCTGGTAGAAAGACAGAGTTGGAGAACATGTCTGGATCTACTTCTGTTCCTAAGGTTTTTTTCAATGAGATACTTATTGGAGGCTTAACTGAGCTAAAAACCTTAAATGAATCTGGCAAGCTTGATGAGAAGATTGACTTTCTAATTACTGAACCACCATCATTTGAAGGGCCATTTCCACCCCTTTCTGGAGAGGATGATATGTCCAGTAGTGGGGCACTTGATGAAATGGCTCTAATTGCGCGGAAAATGAAAGAATCTATTGTTGTGAAGGACAGATTTAGCAAAATGCGAAGATTCACTAACTGTTTTCTTGGCTCTGAAGCTGTGGATTTCTTATCAGAAGATCAATATTTAGAAAGGAAAGAGGTAATCTTGATTTTGAGTTTCAAGCATTGTCTAGCTGTCGAGTTTGGACGAAAGCTTGCTAGCAAACTCTTCTTTCAGCATGTTCTTGATGAGAATCTATTTGAGGATGGTAATCACTTGTATCGGTTTTTGGATGACGACCCAATTGTAGCATCTCAGTGTCACAACATCCCAAGGGGGATAATTACTGTGAAACCTAAACCTATAACTGAAATTGCATCAAGGCTGAGATTTTTGTCATATGCAATGTTTGAAGCCTATGCCTCTGAAGACGGACGACATGTCGATTATAGAAGTATGCACGGCAGTGAGGAGTTTGCAAGGTATCTAAGAGTGGTAGAAGAGCTACAAAGAGTGGAAATATTGAATATGTCTAGAGAAGAGAGGCTTGCTTTCTTTATTAATCTTTATAATATGATGACTATTCATGCAATCTTAATATGGGGTCATCCAGCTGGAGCACTTGAAAGGAGGAAATTGTTTGGAGACTTCAAATATGTTATTAGTGGGTGCACCTACTCACTTTCAGCTATTCAAAATGGCATTTTGAGGGGCAACCAACGACCACCGTATAGCCTCATGAAGCCATTTGGTGCAAAAGATAAACGTGCCAAAGTGGCCCTATCTTTCTGTGAGCCCCTTATTCATTTTGCTCTAGTATGCGGTACTCGATCTGGGCCTGCACTGCGATGTTATTCTCCTGGGGAAATAGACAAAGAACTAATGGATGCAGCCCGTAATGTCTTAAGAAGTGGAGGCCTTTTAATAGATTTTACAACAAAGGTTGCAAATGCCAGTAAGATCCTTAAATGGTTTAGTGTAGATTTTGGCAAGAATGAGATAGAGGTAATGAAGCATGTCTCAATCTACTTAGATCCAGCTGACCTTGAATTATTAGAAAATGATGTGAGTGTAAAAAGTAAAAAAAAAGGTGTTGAATCTTAA 2496 0.387 MDEVKFDNEQDYVSDKVNSHAVEKLEGDAFTIQNEDHNKESKDMEIQHVDKMDEVKFGNEQDDVSDKVNSHAVEKMEGDAFAIQNEDHNKESKDMEIQHVGYDGSEFDKELDDISDKMDEMKDVKLSTREEMIDNMIGESEFAQRVDESMDLQRGPQEENLEASSSIVPGESFHEVLESISLNSEIQANDDRKEYSGANIDNNGDFESKSQEVHLDNNFTHNDMGEENDNTSNEDRNSELVFDGKEVLGVEASQGTLADVLYAEPETPRVVERAVALTNFVRVKSVAVVSTMLRRISGKIGEDSVCNYDDVGKDVSNLHSESEPKDVSKKEVEKATLNPLNQREDPINEGPPKPIAMKGRIILYTRLGCQESKKVRQFLYMKRLRYVEINIDVYPGRKTELENMSGSTSVPKVFFNEILIGGLTELKTLNESGKLDEKIDFLITEPPSFEGPFPPLSGEDDMSSSGALDEMALIARKMKESIVVKDRFSKMRRFTNCFLGSEAVDFLSEDQYLERKEVILILSFKHCLAVEFGRKLASKLFFQHVLDENLFEDGNHLYRFLDDDPIVASQCHNIPRGIITVKPKPITEIASRLRFLSYAMFEAYASEDGRHVDYRSMHGSEEFARYLRVVEELQRVEILNMSREERLAFFINLYNMMTIHAILIWGHPAGALERRKLFGDFKYVISGCTYSLSAIQNGILRGNQRPPYSLMKPFGAKDKRAKVALSFCEPLIHFALVCGTRSGPALRCYSPGEIDKELMDAARNVLRSGGLLIDFTTKVANASKILKWFSVDFGKNEIEVMKHVSIYLDPADLELLENDVSVKSKKKGVES* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5920 831 Gene3D - 464 567 IPR036388 -
Lja1g5920 831 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 482 560 IPR000591 GO:0035556
Lja1g5920 831 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 14 820 - -
Lja1g5920 831 SUPERFAMILY "Winged helix" DNA-binding domain 470 569 IPR036390 -
Lja1g5920 831 SMART DEP_3 478 562 IPR000591 GO:0035556
Lja1g5920 831 ProSiteProfiles Glutaredoxin domain profile. 349 446 - -
Lja1g5920 831 CDD DEP 474 559 - -
Lja1g5920 831 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 14 820 - -
Lja1g5920 831 Gene3D Glutaredoxin 356 441 - -
Lja1g5920 831 SUPERFAMILY Thioredoxin-like 358 439 IPR036249 -
Lja1g5920 831 Pfam Protein of unknown function, DUF547 640 764 IPR006869 -
Lja1g5920 831 Pfam Glutaredoxin 361 417 IPR002109 -
Lja1g5920 831 ProSiteProfiles DEP domain profile. 478 562 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5920 Lja-Chr1 108282124 108289331 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5920 - - ccaj:109814814 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5920 1 108282124 108289331 Lja1g5920 1 108282124 108289331 ECH
Lja1g5920 1 108282124 108289331 Lja1g5156 1 75318125 75321791 PCT