Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5156 ATGGAAAATCAACAATTGGTGGATGCAACTTCTCAAGCTGTTGAGAAGCTGCAAGTGGATTCCTCTGCCATACAGGATGAACAATCGAAGGAACATGTGAAAGATGTTAGGCCTGAGTCTAATACTCATGAGGGAACAAGTGACAGTGTTGTCGGAGAATCTGAATTGGCTCAGAGGAAAGATGAGAGTACTAGGGATTTGGAGTCTGGAACTGAACAAGAAAACATAGAGGCTAAATCTGAAACTGAAGTCAATTCTGATGGTAAGGTTGATGCCGGTGGAGATTTTGAGCCTAAAAGTCAAGAAACAGATATAGGTAATAATTCTGGACAGAATGACTTGATGAAAGAGGAGGATGATAGTAGAGATGAAATTCCAACTGAGGACAACAATTTGGACCCTGTGTTTGATGGAACTGAGATTCCGGGAATGGAAGCCAACCGGAGCACCTCTGGCCGTAGGTTCAATGCAGGGCCGGACACTCCAGGTGTGGTTGAGAAAGCAGTTGCTCTTAAAAATTTTGTTAAGCAGAAAAGTGCAGTGGCAGTCTCCAATGTGCTGCGTCGCCTTTCTGGAAAAAGTGATGATGGTGTTGTGGGTAATTCTGAGGGTGAAGGTAAGGATGTTTCTCCTGAGAAGGCTGTGGAGAAATCTGGCTGGAATCCCTTGAATTATATCAAGAAATCGTCTGATGTTGATCTTGAAAACATAGCTGAGCAGAGGGATTCAATAACAGAAGGTTCAGCACCACCCATAGCAATGAAAGGAAGGATTATGCTTTACACAAAACTAGGGTGCCAAGAATCTAAAGAGATTAGGCTATTTTTGCGTACGAAAAGGCTTGGATATGTGGAAATCAACATAGATGTATATCCCAGTAGAAAGGTTGAGTTGGAAAAGATTTCTGGATCGACTTCTGTTCCTAAGGTTTTTTTCAATGAAATACTTATTGGAGGCTTGAGTGAGCTAAAGACCTTAGATGAGTCTGGAAACCTTGATGAGAAAATTGACTTTCTGATTGCTGAAGCACCATTGTTTGAAACCTCATCACCGCCTCATTCTGGAGAAGATGATGAGTCCAGCACTGGAGCACCTGATGAACTGGCTCTTATCGTCCACAAGATGAAAGAAACTATTGCTGTGAAAGACCGATTGCACAAAATGCGCAGGTTCACTAACTGTTTTCTGGGCTCAGAGGCTGTAGACTTCTTATCAGAAGATCAATATTTGGAAAGGCATGAGGCTGTTGATTTTGCACGAAAGCTTGCCGGCGAATCCTTCTTTCGGCATGTTCTTGATGAGAATCTATTTGAGGATGGTAATCACTTGTATCGATTTTTGGATGATGATCCAATTGTGGTGTCACAATGTCACAACATTCCTAGGGGCATAATTACCGTGAAGCCGAAGCCTCTGGCAGAAATTGCATCAAGGCTAAGGTTTCTCTCCAATGCAATGTTTGAAGCCTTTGTTTCTGAAGATGGACGAATTGTTGATTATACAAGTCTGCATGGAAGTGAGGAGTTCGCAAGGTATCTGAGGATTGTCGAAGAGCTCCAACGAGTAGAAATATTGGATTTGTCTAGAGAAGAGAAGCTCGCGTTCTTTATTAATCTCTATAATATGATGGCCATCCATGCAATCTTGGTACTGGGTCATCCAGATGGGGCACTGGAAAGAAGGAAATTATTTGGAGAGTTCAAATATGTTATTGGTGGGTCCACCTACTCCCTTTCAGCTATTCAAAATGGCATATTGAGGGGAAACCAGAGACCACCATATAACATGACGAAGCCATTTGGTGCTAAAGATAGGCGTTCAAGGGTGGCACTTCCTTACCCTGAGCCTCTTATTCATTTTGCTTTGGTGTATGGTACCCGATCTGGGCCTGCACTGCGGTGCTATTCTCCTGGAAAGATTGACGAAGAACTATTGGATGCAGCTCGTAATTTCTTAAGACATGGAGGGGTTGTAATAGATTTTACTGCAAAGGCTGTACAAGCTACCAAGATCCTTAAATGGTATAGTATAGATTTTGGTAAGAACGAGGTAGAGGTGATCAAGCATGTGTCAAACTATTTAGATCCAGCAGACTCAGAAATATTGTTGGACCTGCTTGCTACTTCTGAGTTGAAGGTGACATATCAGTCTTATGACTGGGGTTTGAACTGCTAG 2175 0.4248 MENQQLVDATSQAVEKLQVDSSAIQDEQSKEHVKDVRPESNTHEGTSDSVVGESELAQRKDESTRDLESGTEQENIEAKSETEVNSDGKVDAGGDFEPKSQETDIGNNSGQNDLMKEEDDSRDEIPTEDNNLDPVFDGTEIPGMEANRSTSGRRFNAGPDTPGVVEKAVALKNFVKQKSAVAVSNVLRRLSGKSDDGVVGNSEGEGKDVSPEKAVEKSGWNPLNYIKKSSDVDLENIAEQRDSITEGSAPPIAMKGRIMLYTKLGCQESKEIRLFLRTKRLGYVEINIDVYPSRKVELEKISGSTSVPKVFFNEILIGGLSELKTLDESGNLDEKIDFLIAEAPLFETSSPPHSGEDDESSTGAPDELALIVHKMKETIAVKDRLHKMRRFTNCFLGSEAVDFLSEDQYLERHEAVDFARKLAGESFFRHVLDENLFEDGNHLYRFLDDDPIVVSQCHNIPRGIITVKPKPLAEIASRLRFLSNAMFEAFVSEDGRIVDYTSLHGSEEFARYLRIVEELQRVEILDLSREEKLAFFINLYNMMAIHAILVLGHPDGALERRKLFGEFKYVIGGSTYSLSAIQNGILRGNQRPPYNMTKPFGAKDRRSRVALPYPEPLIHFALVYGTRSGPALRCYSPGKIDEELLDAARNFLRHGGVVIDFTAKAVQATKILKWYSIDFGKNEVEVIKHVSNYLDPADSEILLDLLATSELKVTYQSYDWGLNC* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5156 724 Pfam Protein of unknown function, DUF547 526 652 IPR006869 -
Lja1g5156 724 SMART DEP_3 375 448 IPR000591 GO:0035556
Lja1g5156 724 MobiDBLite consensus disorder prediction 54 98 - -
Lja1g5156 724 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 8 723 - -
Lja1g5156 724 Pfam Glutaredoxin 258 314 IPR002109 -
Lja1g5156 724 Gene3D - 364 452 IPR036388 -
Lja1g5156 724 ProSiteProfiles Glutaredoxin domain profile. 246 343 - -
Lja1g5156 724 ProSiteProfiles DEP domain profile. 375 448 IPR000591 GO:0035556
Lja1g5156 724 MobiDBLite consensus disorder prediction 25 42 - -
Lja1g5156 724 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g5156 724 MobiDBLite consensus disorder prediction 200 214 - -
Lja1g5156 724 SUPERFAMILY Thioredoxin-like 255 337 IPR036249 -
Lja1g5156 724 CDD DEP 367 445 - -
Lja1g5156 724 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 379 446 IPR000591 GO:0035556
Lja1g5156 724 SUPERFAMILY "Winged helix" DNA-binding domain 368 452 IPR036390 -
Lja1g5156 724 MobiDBLite consensus disorder prediction 194 214 - -
Lja1g5156 724 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 8 723 - -
Lja1g5156 724 MobiDBLite consensus disorder prediction 1 140 - -
Lja1g5156 724 Gene3D Glutaredoxin 253 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5156 Lja-Chr1 75318125 75321791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5156 - - ccaj:109797380 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5156 1 75318125 75321791 Lja1g5156 1 75318125 75321791 ECH
Lja1g5920 1 108282124 108289331 Lja1g5156 1 75318125 75321791 PCT