Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5912 ATGAAGACTCGTAGTAGCTCTGCCAAAATCTCTGCAAAATGGCTTCCCATTTTCTCCATTTTTTCCTTCATTCTTGGAATGCTCATCACAACAAGGATGTGGGAACCACCTGAATCCAATGGCATGTTTCTTTCAAAACGCAGGAATGAACAAGAATTGCAAGTTGTCTCAGGGGATTGTGCTTCAAAAAAGGACAAGGATGTAATGGATGAAGTGTACAAAACCCATGAAGCTATTAAATCTCTAGACAAGCAAGTTTCAATGCTTCAGATGGAGCTGGCAGCATCCAGGAGTGCGCGAAAACTAGGGATCTCAGATAATTCTTCGGCTATGTCTAATAACACTCTGGGCTCGGGGCTCTCCAATGAAGGATCTTCCAGGAAGAAAGTGTTTATAGTGATTGGCATAAACACAGCTTTCAGTAGCAGGAAGCGTCGTGATTCGGTCAGAGATACGTGGATGCTTCAAGGTGAACAACTTCTTCAATTGGAACGCGAGAAGGGAATTGTTATTAGATTCATGATTGGTCACAGTGCGACTTCCAATAGCATTCTAGATCGAGCTATTGATTCAGAAGAAGCCCAGCACAATGACTTCCTTCGCCTGGAACATGTTGAAGGGTATCATGAACTGTCTGCAAAGACAAAAACTTTCTTTTCCACTGCAGTTGCAAAGTGGGATGCTGATTTCTATGTGAAAGTGGATGATGATGTCCATGTTAATTTAGGTGTACTGGCAACAACCCTTGCTCGTCATCGTTCAAAATCCAGGGTCTACATCGGATGTATGAAGTCTGGACCTGTTCTTTCTCGAAAGGATGTTAAGTACCACGAACCCGAGTTCTGGAAGTTTGGAGAGGAAGGGAATAAATACTTCAGACACGCAACTGGGCAGATATATGCAATCTCTAAGGATCTGGCCACTTACATTTCCATCAACCAGCCGATATTGCACAAATATGCTAATGAAGACGTCTCACTTGGTTCATGGTTCATTGGTCTGGAAGTTGAGCATATTGATGATCGCAGTATGTGCTGTGGGACTCCTCCAGACTGTGAGTGGAAGGCACAAGCGGGTAACATATGTGTTGCATCCTTTGACTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATTTGTTCACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTAGTTTAG 1200 0.4358 MKTRSSSAKISAKWLPIFSIFSFILGMLITTRMWEPPESNGMFLSKRRNEQELQVVSGDCASKKDKDVMDEVYKTHEAIKSLDKQVSMLQMELAASRSARKLGISDNSSAMSNNTLGSGLSNEGSSRKKVFIVIGINTAFSSRKRRDSVRDTWMLQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHNDFLRLEHVEGYHELSAKTKTFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLARHRSKSRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKFVHSKCGEGDGAVWSALV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5912 399 Gene3D - 121 345 - -
Lja1g5912 399 Pfam Domain of unknown function (DUF4094) 11 99 IPR025298 -
Lja1g5912 399 PANTHER HEXOSYLTRANSFERASE 3 391 - -
Lja1g5912 399 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 391 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lja1g5912 399 Pfam Galactosyltransferase 144 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5912 Lja-Chr1 108119121 108124236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5912 1 399 Glycosyltransferase AT1G77810 70.050 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5912 K20855 - gmx:100804402 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5912 1 108119121 108124236 Lja1g5912 1 108119121 108124236 ECH
Lja1g5912 1 108119121 108124236 Lja1g5114 1 73926782 73931927 PCT