Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5114 ATGAAGACCAGAACCTCCACCAAAATCTCTGCAAAATGGCTACCCATTTTCTCTGTCTTTTCCTTCATTCTTGGTGTGTTCATCACAAGCAGGATGTGGGAGCCTCATGATTCAAATGGTTTGATGATTTCGCAGCTTCAGCGTGATCAACAACTGCAAGTGATCTCAGAGGACTGTGATACTAAGAATAAGCAGCAGCCTAAGGATGAAATGAATGAATTGTACAAAACCCATGAAGCCATTCAAGCTCTAGACAAGCAAGTTTCCATGCTGCAGATGGAATTAGCAGCAGCTAGAAATTCTCGTGGGACCAACATCTCAGACTCAGATGGCTCAGCCAACACTTCTGGGGATGGCTCTCCCAGGAAGAAGGCATTTGTAGTGATAGGCATAAATACTGCTTTCAGTAGCAGGAAGCGGCGTGATTCGGTTAGAGAGACTTGGATGCCTCAAGGCGAGCAACTTCTTCAATTGGAACGGGAGAAGGGAATTGTTATTAGATTCATGATCGGGCACAGTGCAACTTCCAACAGCATTCTTGATCGAGCTATTGATTCTGAAGAATCCCAGCACAAAGACTTCCTTCGCCTGGAACATGTTGAAGGGTATCATGAGCTGTCTGCAAAAACAAAGATTTTCTTTTCTACTGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAAGTGGATGATGATGTCCATGTCAATTTAGGTGTCCTTGCATCAACCCTTGCTCGGTATCGTTCAAAACCCAGGGTCTACATGGGGTGCATGAAATCTGGACCTGTCCTTTCTCGAAAGGATGTCAAGTACCATGAACCTGAATTTTGGAAGTTTGGAGAAGAAGGGAACAAATACTTCCGACATGCAACTGGGCAGATATATGCAGTTTCTAAGGATTTGGCCACTTACATTTCTATCAACCAGCCGATTTTGCATAAATACGCTAATGAAGATGTCTCACTCGGTTCATGGTTGATTGGTCTTGAAGTTGAGCATATTGATGAGCGCAGTATGTGCTGTGGAACTCCTCCAGATTGTGAGTGGAAGGCACAGGCAGGTAACATATGCGTCGCATCGTTTGATTGGAGCTGCAGTGGAATCTGCAAGTCTGTGGAGAAGATTAAATATGTGCACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTATTGTAG 1185 0.443 MKTRTSTKISAKWLPIFSVFSFILGVFITSRMWEPHDSNGLMISQLQRDQQLQVISEDCDTKNKQQPKDEMNELYKTHEAIQALDKQVSMLQMELAAARNSRGTNISDSDGSANTSGDGSPRKKAFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEESQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLASTLARYRSKPRVYMGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAVSKDLATYISINQPILHKYANEDVSLGSWLIGLEVEHIDERSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5114 394 Coils Coil 81 101 - -
Lja1g5114 394 PANTHER HEXOSYLTRANSFERASE 8 385 - -
Lja1g5114 394 MobiDBLite consensus disorder prediction 100 121 - -
Lja1g5114 394 Pfam Domain of unknown function (DUF4094) 10 100 IPR025298 -
Lja1g5114 394 MobiDBLite consensus disorder prediction 100 119 - -
Lja1g5114 394 Pfam Galactosyltransferase 139 335 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lja1g5114 394 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 385 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lja1g5114 394 Gene3D - 117 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5114 Lja-Chr1 73926782 73931927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5114 1 394 Glycosyltransferase AT1G77810 71.788 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5114 K20855 - gmx:100776715 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5912 1 108119121 108124236 Lja1g5114 1 73926782 73931927 PCT