Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5825 ATGACGGAGGACAACGCTCCGATGCTGGAGGACAACGCTCCTCCTCCTCCTCCTCCTACTCTCGCCGCCGCAGACGGCGGCGGTGATTGGTCTTCTTCGTTCAGGGGTCTGTCGTCGTTCGTGAAGAAGGGCGACCGGCAATTGTTCGGTGTGGAACTCCGGCCTGATGAGACCACCATAGTGTCGTGGAAGAAGCTGGTGAAGGACTCCCATAATGTTAACCAAGGATCCGATCAACGTTCCAATGCTCTCGAGTCCAGAATCGCTCCGGGACAACCTACTGAGACTAAAGAAGAAGATGCTCCTCAAACACACCGTTTCAGTGCTGTTATAGAGAAGATTGAACGCCTTTACACGGGTAAGGATAGTAGTGATGAGGAGGATCTACTTCCTGATGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCTGAGCTGGATGAATATTTTGCGGTTGATAATTCTGCAATTAAACATGATGGTTTCTTTGTAAACAGGGGGGCACTGGAACGCATTGCAAGAAATGAACCTCCACCATTACCTACTCAGCAAGTAAAGAAAAGGCGCCGAAAAGATATGTCAAAGGATCTTGGTGAAAATATTGATGGTCATGTTTCAAATAAGTGTGTAAAAGTGGGCAAGACAGCTGCTAGAAAGGCTGGACCATTACCTGTGAAAAAATCTTTAAATTGCTCACAGGATTTAGCTGTACCGGGTGAACATGGTGAAGACTTAAAATTTCAGAATCAATTGGACGTCTCTGGAATTAGTTCAAAAACGAAAATGGCTGATACTAGACCAAAATCAGATCCTTCTGTGGCAGAAGCAAAAGTTGTTGATAAAAAGATAGGAGTACATCAATCTAAAAACACAAGTGCCAAATCCCAACGTGCAAGAACCCCAAGTGTTGATAATTCAGAAAATACAGCAGAATCCCAACTTGCAAGAACCCCATGTTCAAAGGACAAAAATGGCATCCGTGAACTACCAGATCTCAACTTGTCTGAGGGAAAATCTGCTATGCTAACACCTAAATCTGAAAACATACTCAAGAAAGATGGTTCTGCTGTTAGGCCAAAGGTTACGATGCTCGAGAAAGCAATTCGAGAGTTAGAAAAGATGGTTGCAGAATCCAGACCGCCAACTACAGAAAACCAAGAGGTTGATGCCACATCGCAGGCTATCAAACGAAGATTGCCTAGAGAGATAAAGCTAAAACTTGCTAAAGTTGCTAGATTAGCGCAGGCAAGCCAAGGTAAAGTATCAAAGGAGTTAATTAACCGTCTTATGAGTATTCTTGGGCACCTAATGCAGCTCAGAACACTAAAGAGAAACTTAAAAATTATGATCAGTACGGGTATGTCTGCAAAGCAGGAGAAAGATGAAGGGTTTCAACGGATAAAGAAGGAAGTTGTTGAAATGATTAAGATCCAGGCCCCAACTATGGAATCTAAGCAACAGCATCAAGCTGGAGCATCTGGAGATCAAGAATTAGGTCCTGATGGAAAAGCAATAACTACAAATTTTTTTAGCATGGACACTGCATTGGAGGACAAGATCTGTGATCTCTATGACCTTTTTGTTGATGGGTTGGATGAAAATTCAGGTCCACAAATCAGAAAGTTGTATGCTGAGCTAGCAGAACTATGGCCAAATGGTTACATGGACAACCATGGTATCAAACGTGCAATTTGCAGGGCTAAAGAGAGGCGCAGAACACTTAATAGCAAACCCACGGACCAGGAAAAAACTAAGAGGAAAAAGTTATTGGCACCTCGACGTGAGGAGAACGTTTGCGCTAGTTCAGTTTCTTCACAACAGAACGTGCTAGAGAGATTAGCTCCAGAATCTGGCAGTCATTCTGCTTCACCGAACAAGGCAGTTTCTAATACAGTTACAGCTGCTCGGGTTCTCAATCCTTCTGTGAATGGACCAAAGCAAGTAAAAGCGAAGGGAAATTCAAGCGGTTCTTTAGATGTTGTCAGGGGTGCAGATGGTGTTTTAATAAAGAAGAAGGTGGTAAAGAAAAAGCAAGAACATAAGTTGGAAGGAACTCATTTTCGCCCTGAGAAGCTGGCTTCTTTGCAGGGAGAAGAAAGACAGAGATCTCCAAAGCAGTCTGCAGGCCTTCCCTCCAAATCAAACCTTCAGCCAACATCCCTCCCTGTGCCTGGTCTTGAACAATCGAGCTAA 2199 0.4366 MTEDNAPMLEDNAPPPPPPTLAAADGGGDWSSSFRGLSSFVKKGDRQLFGVELRPDETTIVSWKKLVKDSHNVNQGSDQRSNALESRIAPGQPTETKEEDAPQTHRFSAVIEKIERLYTGKDSSDEEDLLPDDDQYDTEDSFIDDAELDEYFAVDNSAIKHDGFFVNRGALERIARNEPPPLPTQQVKKRRRKDMSKDLGENIDGHVSNKCVKVGKTAARKAGPLPVKKSLNCSQDLAVPGEHGEDLKFQNQLDVSGISSKTKMADTRPKSDPSVAEAKVVDKKIGVHQSKNTSAKSQRARTPSVDNSENTAESQLARTPCSKDKNGIRELPDLNLSEGKSAMLTPKSENILKKDGSAVRPKVTMLEKAIRELEKMVAESRPPTTENQEVDATSQAIKRRLPREIKLKLAKVARLAQASQGKVSKELINRLMSILGHLMQLRTLKRNLKIMISTGMSAKQEKDEGFQRIKKEVVEMIKIQAPTMESKQQHQAGASGDQELGPDGKAITTNFFSMDTALEDKICDLYDLFVDGLDENSGPQIRKLYAELAELWPNGYMDNHGIKRAICRAKERRRTLNSKPTDQEKTKRKKLLAPRREENVCASSVSSQQNVLERLAPESGSHSASPNKAVSNTVTAARVLNPSVNGPKQVKAKGNSSGSLDVVRGADGVLIKKKVVKKKQEHKLEGTHFRPEKLASLQGEERQRSPKQSAGLPSKSNLQPTSLPVPGLEQSS* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5825 732 MobiDBLite consensus disorder prediction 68 89 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 265 286 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 92 125 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 1 30 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 571 609 - -
Lja1g5825 732 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 35 732 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 676 700 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 676 732 - -
Lja1g5825 732 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 35 732 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 68 139 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 287 321 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 571 596 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 639 656 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 639 661 - -
Lja1g5825 732 MobiDBLite consensus disorder prediction 701 732 - -
Lja1g5825 732 Pfam HPC2 and ubinuclein domain 124 172 IPR014840 -
Lja1g5825 732 MobiDBLite consensus disorder prediction 259 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5825 Lja-Chr1 104659716 104669204 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5825 - - lja:Lj0g3v0217399.1 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5825 1 104659716 104669204 Lja1g5825 1 104659716 104669204 ECH
Lja1g5825 1 104659716 104669204 Lja1g4997 1 70092803 70101189 PCT