Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4997 ATGGCGGAGAAGGAGGAAGAGAAGAGGGCTTCCTCGTCGTTCGTCAAGAAGGGTGACCGGAAAACTTTCACGGTGGAGCTCCGCCCTGGAGAGACCACCATTGTGTCGTGGAAGAAGCTCCTCAAAGACGCTAACAAGCATAACGGATCCACTTCCGCTTCTCATCAACACCCTATAATCGCTGCTTCGGGAGAACCAGTTGAGAATGAAGAAAAAGATGCTAATCAGCCAAACCGTTTCAGTGCTGTAATCGAGAAAATTGAACGCCTTTACATGGGTAAGGATAGTAGTGATGATGAAGATACGCGTGATGTTCCTGATGATCAGTATGATACCGAAGACTCTTTTATAGATGATGCTGAGCTGGATGAATATTTTGAGGTTGATAATTCAGCAATCAAACATGATGGGTTCTTTGTAAATAGGGGGAAATTGGAACGCATAAATGAACCTTCTATAGTACCTAATCAGCAACCAAAGAAAAGGCGAAGAAAAGATAATGATGAAAATGGATCAAAGAAACATGCAAAAGTGGGCAGGCCAGCCTCTGGAAAAACAGCTTCACTACAAGCAAAGAATATATGTAATTCCTCCAAGAATTTGGTTTCACCTAGTGAACATTATGAAGACCTGAAGCTTCAGAATCAAGTGGATGTCTCTGGAATCAGTTCCAAAAAGAAAACTGCTGATATCAAACCAATATTGGACCCTTCTGTCTCTTTGAAAGCACCAATTGGTGATGTTCCTGCTTCTGTCACAGAAACAAAAGATGCTGATCAGCAGAAGCCAGGAACTTTTCAATCTAAGAACACAAGTGATAAATTTAAAGATACAAGTGGAGCCTTTGATGCATCTCATCAGAAGCACCATGAAAAAAGTACTTGTGCAAATTCCAAATCCCAACCTGGAAAGCAATCAAGTAATATTGATGGTTTGGAAAATATCAGCAGGTCAAAAGAAAAAAACGGTATGCGCCGTCAACTGCCGGATCTTAACTTGTCTGTGGGAAAGTCTGCTAAGCAAGCAAAAAAATCTGAATACTTGCACAAGAAAGACGGTTCTAATGCTAGGCCAAAAAGTTCAATGCTTGAAAAGGCTCTTCGCGAGTTGGAGAAAATGGTTGCAGAATCAAGGCCACCTGCAGTGGAAAACCAGGAGGCTGATCCAACAGCCCAGGCAGTCAAAAGAAGGTTGCCCAGAGAAATAAAGCTAAAGCTTGCTAAAGTTGCTAGACTAGCGGCAAGCCATGGGAAAGTATCAAAAGAGTTAATTAACCGTCTTATGAGTATTCTTGGGCACTTGATGCAGCTCAGAACATTAAAGAGAAACTTAAAAATAATGATCAGTGTGGGTCTGTCAGCGAAGCAGGAGGAGGATGATAGGTTTCAACAGATAAAAAAGGAAGTTGTTGATATGATTAAGATGCACGCCACGAGTCTGGAATCCAAGCAACCGCAGAAAGCTGGAGCGTCTGATGACTTTCAAGAATTCGGTCCTGATGGAAAACCAATAACAAAAAAGTTTAGTATGGACACTGCCTTGGAGGAGAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGGTTGGATGAAAATGCTGGTCCACAGATCAGAAAGTTGTATGCAGAGCTTGCCAAATTATGGCCAAATGGCTACATGGACAACCATGGGATCAAACGTGGAATCTGCAGGGCTAAAGAGAGGCGCAGAGCATTGCACAGCAAACAGAAGGATCAGGATAAAATCAAGAGGAAAAAGTTGTTGACTCCTAAGCAAGAGGAGAACGTTCAGTTTGTATCTAGTTCAGTTACTTCACAGCAGAACCCGCGAGATAGACAAGTTCCAGAATCCAGCAGTTATGCTTTTACTTCGGCGAACAAGCCAGTTTCTAATACAAGCTCAGCTGTCCGGGTCCCCAGTCCTATGAATGTTGTCAAAGAAGAAGCAAACAGTGCCCTCGATGATTTCAGGGTTGCAGATGTTGTTTTAACAAAGAAGGTGAAAAGAAAACCAGAACTCGAGTTGGAAGGAACACATTCTGGTCCTGAGAAGTTAGCTTCTTTGCAGGGAGAGGAAAGGCCCAGGTCCCAAAAGCAGTCTGCGCCTGCGGGGTCATCCCACCAAATCAAATCCTCAGCCAACATCTCTGGTTGGTCTGGAACAGTCAAGCTAACATGA 2178 0.4302 MAEKEEEKRASSSFVKKGDRKTFTVELRPGETTIVSWKKLLKDANKHNGSTSASHQHPIIAASGEPVENEEKDANQPNRFSAVIEKIERLYMGKDSSDDEDTRDVPDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPSIVPNQQPKKRRRKDNDENGSKKHAKVGRPASGKTASLQAKNICNSSKNLVSPSEHYEDLKLQNQVDVSGISSKKKTADIKPILDPSVSLKAPIGDVPASVTETKDADQQKPGTFQSKNTSDKFKDTSGAFDASHQKHHEKSTCANSKSQPGKQSSNIDGLENISRSKEKNGMRRQLPDLNLSVGKSAKQAKKSEYLHKKDGSNARPKSSMLEKALRELEKMVAESRPPAVENQEADPTAQAVKRRLPREIKLKLAKVARLAASHGKVSKELINRLMSILGHLMQLRTLKRNLKIMISVGLSAKQEEDDRFQQIKKEVVDMIKMHATSLESKQPQKAGASDDFQEFGPDGKPITKKFSMDTALEEKICDLYDLFVDGLDENAGPQIRKLYAELAKLWPNGYMDNHGIKRGICRAKERRRALHSKQKDQDKIKRKKLLTPKQEENVQFVSSSVTSQQNPRDRQVPESSSYAFTSANKPVSNTSSAVRVPSPMNVVKEEANSALDDFRVADVVLTKKVKRKPELELEGTHSGPEKLASLQGEERPRSQKQSAPAGSSHQIKSSANISGWSGTVKLT* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4997 725 MobiDBLite consensus disorder prediction 254 278 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 157 176 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 342 361 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 667 725 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 1 20 - -
Lja1g4997 725 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 5 702 - -
Lja1g4997 725 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 5 702 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 45 114 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 692 725 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 588 636 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 296 313 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 213 361 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 593 636 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 144 191 - -
Lja1g4997 725 MobiDBLite consensus disorder prediction 279 295 - -
Lja1g4997 725 Pfam HPC2 and ubinuclein domain 104 146 IPR014840 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4997 Lja-Chr1 70092803 70101189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4997 - - gsj:114415452 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4997 1 70092803 70101189 Lja1g4997 1 70092803 70101189 ECH
Lja1g5825 1 104659716 104669204 Lja1g4997 1 70092803 70101189 PCT