Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5664 ATGGCTGGTTTGGTAGAACAAGAGGGTCAACAAATTCTTGGAATTGACGAAGAGGGTCAGAACAAGGTGACTGAGAATAAACGCACACATTTGGAAGGGGAAAGGGACATGATGGCTCCTGCAGCAGGAAGTTCAATTCACAGGTCTGGTTCAAGGCCTCAGCTTGATGTCAGCAAAGCTGAGATTCAAGGGAATGTGGAGGAGAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCACCTGGCTCTTGACATTGGAGGATCTTTGATAAAGTTGGTGTACTTTTCTAGACATGAAGACCAATCAGCTGATGATAAAAGGAAAAAAAGTGTGAAGGAGCGACTGGGGCTTTCTAATGGTAACAGGAGAAGCTTCCCTATTCTTGGTGGAAGGCTTCACTTTGTGAAGTTTGAAACAAGAAATATCAATGAGTGCTTGGATTTCATTCATTCCAAGCAGCTTCACTGTGGCGGGCTGGAGTCACGTTTCTCTGATGATGTGGCTGACCAGAATGGCATAATCAAGGCTACTGGTGGTGGAGCATACAAGTATGCTGACCTTTTCAAAGAAAGACTGGGGGTTAGTCTCGACAAAGAAGACGAAATGGATTGTCTTGTGGCCGGAGCAAATTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCAAAAAGAGTTTGTTCAAATTGACCCTAATGATATGTTCCCTTATCTTCTGGTTAATATTGGATCTGGTGTTAGTATGATTAAGGTTGACGGGGATGGGAAATTTGAGAGGGTCAGTGGTACTAATGTTGGTGGTGGTACTTATTGGGGTTTGGGAAGACTGTTAACAAAGTGCAAGAGCTTTGATGAGTTACTTGAGCTGAGCCAGAAAGGAGATAATAGAACTATTGACATGCTTGTTGGGGACATTTATGGTGGTTTGGACTATTCTAAGATTGGCCTATCAGCTTCCACTATTGCTTCAAGTTTTGGAAAAACTATATCAGAAAAAAAGGAGCTTGAAGACTACAGACCTGAAGATATATCACTCTCTCTTCTAAGGATGATTTCATACAATATTGGCCAGGTAGCTTACTTGAATGCACTGCGATTTAAGTTGAAGCGAATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCTTACACCATGGACACTATTTCTTTTGCTGTTCATTTCTGGTCTAATGGTGGAGCTCAAGCAATGTTCTTGCGACATGAAGGCTTTCTGGGAGCCTTAGGTGCATTTATGAGCTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGGTTTCCAATGGGTGCTCCGTACACAGGAGGCAAGATTCATGGCCCACCACTAGGAGACTTGAATGAGAAGATTTCGTGGATGGAAAAGTTTTTGCAAAAGGGAACTGAGATTACTGCACCTGTGCCAATGACTCCTCTTGCTGGAACTACTGGACTTGGGGGTTTTGATGTTCCTTTGTCAAAGGGAAGTACTCTGCGGTCTGATGCGAGTGCTCTAAATGTTGGTGTTCTCCATCTTGTACCAACTTTGGAGGTGTTTCCATTGTTAGCAGACCCAAAATCGTATGAGCCCAATACAATCGATCTCGCAGATCCCAGTGAATTAGAATATTGGTTCACTATTTTGTCAGAGCACTTGCCAGATCTCGTGGACAAGGCTGTTGCAAGCGAAGGTGGAACCGATGATGCCAAACGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCTCTCTTGTCAAGGTTGATGGAGGAGCCTTCTGCATACGGGAAGATAGGCCTGGCCAATCTTTTGGAAATGAGAGAAGAGTGCTTGAGGGAATTCCAGTTTGTTGATGCCTATAGAAGCATAAAGCAGAGGGAAAATGAGGCATCACTTGCTGTTTTACCTGACTTGTTCGCGGAACTTGACAGCATGGATGAGGAAACCAGGTTGCTTACCCTAATTGAAGGTGTACTTGCTGCGAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCATAGACCTTGGCGGGTGGATGATTTTGATGTCTTCAAAGAGAGAATGTTTCGACAGACTGGGGACAAGAAAACGTCCCCTCATAGAAGGGCTTTACTTTTTGTAGATAATTCAGGTGCTGATATTGTTCTAGGAATGCTTCCGCTTGCAAGGGAGCTCCTCCGTCGTGGAACTGAAGTAGTTCTCGTTGCAAACTCGCTTCCTGCATTAAATGATGTGACTGCGATGGAGCTTCCTGATATTGTAGCTGAAGCTGCCAAGCACTGTGACATTCTAAGGCGAGCTGCCGAAGCTGGAGGCTTGCTCGTGGATGCAATGATTAATACTTCAGAGAGCTCTAAAGAAAATTCTTCTTCTGTCCCCTTAATGGTTGTTGAGAATGGGTGTGGTAGTCCATGTATAGACTTTAGACAGGTCAGCTCTGAGCTCGCTGCTGCCGCAAAAGATGCTGATTTGATAATTTTGGAAGGCATGGGTCGATCTCTTCATACTAACCTCTATGCTCGGTTTAAGTGTGATGCTTTGAAGCTTGCAATGGTGAAAAACCAGAGATTGGCTGAGAAGTTGGTTAAAGGGAACATATACGATTGTATTTGCAAATATGAACCTGCTGCATGCTGA 2724 0.4354 MAGLVEQEGQQILGIDEEGQNKVTENKRTHLEGERDMMAPAAGSSIHRSGSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSADDKRKKSVKERLGLSNGNRRSFPILGGRLHFVKFETRNINECLDFIHSKQLHCGGLESRFSDDVADQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDPNDMFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEDYRPEDISLSLLRMISYNIGQVAYLNALRFKLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGGAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMTPLAGTTGLGGFDVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKSYEPNTIDLADPSELEYWFTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSALLSRLMEEPSAYGKIGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLFAELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMHRPWRVDDFDVFKERMFRQTGDKKTSPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTSESSKENSSSVPLMVVENGCGSPCIDFRQVSSELAAAAKDADLIILEGMGRSLHTNLYARFKCDALKLAMVKNQRLAEKLVKGNIYDCICKYEPAAC* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5664 907 Gene3D - 308 417 - -
Lja1g5664 907 MobiDBLite consensus disorder prediction 1 35 - -
Lja1g5664 907 PIRSF PanK_long 37 907 IPR015844 GO:0004594|GO:0015937
Lja1g5664 907 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 706 905 - -
Lja1g5664 907 Gene3D - 76 236 - -
Lja1g5664 907 PANTHER PANTOTHENATE KINASE 31 828 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lja1g5664 907 MobiDBLite consensus disorder prediction 20 35 - -
Lja1g5664 907 Gene3D - 539 627 IPR035073 -
Lja1g5664 907 TIGRFAM panK_eukar: pantothenate kinase 84 427 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lja1g5664 907 SUPERFAMILY AF1104-like 520 904 IPR036075 -
Lja1g5664 907 PANTHER PANTOTHENATE KINASE 2 31 828 - -
Lja1g5664 907 Pfam Fumble 84 426 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lja1g5664 907 SUPERFAMILY Actin-like ATPase domain 83 223 IPR043129 -
Lja1g5664 907 SUPERFAMILY Actin-like ATPase domain 195 428 IPR043129 -
Lja1g5664 907 Pfam Damage-control phosphatase ARMT1-like domain 609 892 IPR002791 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5664 Lja-Chr1 99904040 99925442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5664 K24265 - gmx:100781580 1620.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5664 1 99904040 99925442 Lja4g2276 4 25069757 25080096 ECH
Lja1g5664 1 99904040 99925442 Lja1g5664 1 99904040 99925442 ECH
Lja4g2276 4 25069757 25080096 Lja1g5664 1 99904040 99925442 PCT