Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5657 ATGGCTACTCAATCGCCTTCTGGTCAAACCACAGGTGTAGGTGGTGAAATTGTGCAACCTGCAAATGTTGATCAGCATAGTTCCGATTCAGTGACGTCGGTTTTCGTGAATTCTGAGCCAATTCGGGAGGATCAAGTTCAGAATGCTGTGAAATTTCTGTCACACCCGAAGGTGAGAGGTTCGCCTGTTATCCATAGGCGCACATTTCTGGAGAGGAAGGGGCTCTCGAAGGAGGAGATAGATGAAGCATTTCGGCGAGTGCCTGATTCGCCTCCGAGTGTGCAGACTCAAGATGGACAGTTAAACTCATCATCAAACATTCAGCAGCAAGGCCAGCCACAGGCTTTACAGCCAGCTGTATCTGCTTCTACTGCCGTTACTACTTCGCGGGGAATCTTATCATGGTACAGTTTTCACTGGTCACATGCCCTTGTTACTGTTGGATTTCTGGTTACTTCATGTGCTGGAACAACTATACTAATTAAGAAATCTGTTCTTCCTCGGTTAAAATCTTGGATACGCAACGTTGTCTTCGAAGAAGATTATGGCCAATTAAAGAAAAATAACTCAAAACCATCATTGGCCGAAGAAGTTGCACACGCAGCAAAAGCAGCTGCAGCTGCAGCTGCCGAAATGGCGAAAGCCAGCCAAGAGATGCTGAGTTCAAAAAGTGAAGAGAAGAGATACTTTGTAGAAGTTGTGAGCCTTTTAGATAAGCAAGTGCAAGAAATGAAGGTAATGACTAATGCGATAAGAAGATTGGAAGCTTCAGGTGGACACTCCCTCTCAAAGATAGATGATTACCAAGTCGCTCAGACAAGTTCAAAGATACAGCAATTAATTGCGAATGGAAAGGAAGACTATGAGTTGCGTTCAGGGAAAACATCATTGGCTCCTGCTTCTGTTGAACCATCTAATGCTCCTCATCCAAAGTCATATATGGAGATAATGGCCATGATCCAAAGAGGAGAGAAGCCTTCTAACATTAGAGATATTGATGATTCACCCCCAAACCCTTATCAGCAACCATCAAATCCTCGCTTAGCTCCTAGAGCAAAGCCTTGGGAAGTTAATCAGGTGCAAACCAACTCTACCCAAGTTCTTCAGTCTCAAGTAAATGGCAAGGAATTCAAGATACCAGAGTCCTGGTCGCAGACAAAAAATGTCAGAATCACAGAGACTGATAATGTAATTGAGTATAATGGAGCACCTGCTGCATCCAGTCAGCAGCCAGTCCAACGCGTGTGGGTTCCTCCTCAGCCCCCTCCGGTAGCTATGTCGGCGGCTGCAGAAGCAATCAGACGCCCAAAGCCAATCGTCCCGAAGGAGTCGATGACAGCTGATCAGCCAGTAACTCATTCCGCAGACATCTCTGATGGAGTGGAGATAATCTCAAAATCCAAATCTGAAGGTGCAATAGAAAGTATCAGGGTCAACTCACTTGTAAGCTCTGGTGAGATCCAAGGTCTCAATCACGAAGAGCAATGA 1488 0.4543 MATQSPSGQTTGVGGEIVQPANVDQHSSDSVTSVFVNSEPIREDQVQNAVKFLSHPKVRGSPVIHRRTFLERKGLSKEEIDEAFRRVPDSPPSVQTQDGQLNSSSNIQQQGQPQALQPAVSASTAVTTSRGILSWYSFHWSHALVTVGFLVTSCAGTTILIKKSVLPRLKSWIRNVVFEEDYGQLKKNNSKPSLAEEVAHAAKAAAAAAAEMAKASQEMLSSKSEEKRYFVEVVSLLDKQVQEMKVMTNAIRRLEASGGHSLSKIDDYQVAQTSSKIQQLIANGKEDYELRSGKTSLAPASVEPSNAPHPKSYMEIMAMIQRGEKPSNIRDIDDSPPNPYQQPSNPRLAPRAKPWEVNQVQTNSTQVLQSQVNGKEFKIPESWSQTKNVRITETDNVIEYNGAPAASSQQPVQRVWVPPQPPPVAMSAAAEAIRRPKPIVPKESMTADQPVTHSADISDGVEIISKSKSEGAIESIRVNSLVSSGEIQGLNHEEQ* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5657 495 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 21 475 - -
Lja1g5657 495 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 21 475 IPR025655 GO:0005515|GO:0005778|GO:0016560
Lja1g5657 495 MobiDBLite consensus disorder prediction 90 118 - -
Lja1g5657 495 Pfam Pex14 N-terminal domain 42 86 IPR006785 -
Lja1g5657 495 MobiDBLite consensus disorder prediction 1 37 - -
Lja1g5657 495 Coils Coil 237 257 - -
Lja1g5657 495 Pfam Family of unknown function (DUF5572) 308 357 - -
Lja1g5657 495 MobiDBLite consensus disorder prediction 85 118 - -
Lja1g5657 495 Gene3D - 34 96 IPR036388 -
Lja1g5657 495 MobiDBLite consensus disorder prediction 327 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5657 Lja-Chr1 99511652 99516088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5657 K13343 - gmx:100807229 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2267 4 24926518 24935353 Lja1g5657 1 99511652 99516088 PCT