Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5656 ATGGCAAAGCATTCACCTGACCAGCTAGCCATCGAAGAGTTGAAGAAGCTTATCAGAGAGAAGGAGGAACTTAATGAGTCTGCTGATACAAAAATTGAGGACGTTATAGCTGAGTTGCAGCTGCAGGGGTGTCACCCTACTCCTGAAACTGCTGAGCAGAGAATCATTGATGGGTTTACTTACTTCAAGATCCACAATTTCGACAAGAACCCGGATCTATACAAGGAACTTGCTAAGGGCCAAAGCCCCAAGTTTCTGATATTTGCTTGCTCTGACTCTCGAGTGAGTCCTACCACTATCCTGAACTTCCAACCTGGAGAAGCTTTCATGGTTCGAAACATTGCTAACATGGTCCCTCCATTTAATCAGCTGAGGTACAGTGGAGTAGGTGCGGCCATTGAGTATGCAATCTTGGAGCTTAAGGTGCCAAACATCCTGATCATTGGACACAGCCGCTGCGGTGGAATAGCAAGGCTTATGAGTCATCCAGAGGATGATTCTCCTTCCTTTGAGTTCATAGACGATTGGGTGAAAATTGGTTTACCTGCCAAAATCAAGGTCCTGAAGGAACATGCATGCTGTGATTCCTTAGAACAACGCACACTCTGTGAAAAGGAGTCAGTGAATAACTCCCTAGTGAACCTGCACACATATCCATTTGTTGATAGAGCAATAAGGAGCAAGGGGTTAGGGCTCTTTGGGGGTTACTATGATTTTGTGAATGGAGAGTTCAAGCTTTGGAAGTACGAGTCTCACTTCACCAAACACATTTCTATCCCTCACTGTCACTGA 792 0.452 MAKHSPDQLAIEELKKLIREKEELNESADTKIEDVIAELQLQGCHPTPETAEQRIIDGFTYFKIHNFDKNPDLYKELAKGQSPKFLIFACSDSRVSPTTILNFQPGEAFMVRNIANMVPPFNQLRYSGVGAAIEYAILELKVPNILIIGHSRCGGIARLMSHPEDDSPSFEFIDDWVKIGLPAKIKVLKEHACCDSLEQRTLCEKESVNNSLVNLHTYPFVDRAIRSKGLGLFGGYYDFVNGEFKLWKYESHFTKHISIPHCH* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5656 263 Coils Coil 7 38 - -
Lja1g5656 263 PANTHER CARBONIC ANHYDRASE 4 259 - -
Lja1g5656 263 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 90 97 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lja1g5656 263 Gene3D Carbonic anhydrase 44 259 IPR036874 GO:0004089|GO:0008270
Lja1g5656 263 PANTHER CARBONIC ANHYDRASE 4 259 IPR001765 GO:0004089|GO:0008270
Lja1g5656 263 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 134 154 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lja1g5656 263 SMART Pro_CA_2 78 248 IPR001765 GO:0004089|GO:0008270
Lja1g5656 263 CDD beta_CA_cladeB 58 247 IPR045066 GO:0004089|GO:0008270
Lja1g5656 263 SUPERFAMILY beta-carbonic anhydrase, cab 43 256 IPR036874 GO:0004089|GO:0008270
Lja1g5656 263 Pfam Carbonic anhydrase 86 243 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5656 Lja-Chr1 99447969 99450797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5656 K01673 - gmx:547671 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1744 2 17542227 17546325 Lja1g5656 1 99447969 99450797 ECH
Lja1g5656 1 99447969 99450797 Lja1g5656 1 99447969 99450797 ECH