Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5582 ATGGCTTCTTTGCATCTTGCAGTGCTGCTTCTTTTGGCCTTCACTGCCTCTTCAAGTGCCTCTTGGTGCGTTTGCAAGGATGGAAACGAAGCGAGCTTGCAGAAAGCGCTAGACTATGCTTGTGGAGCTGGGGCTGACTGTAACCCCATCAAACAAACTGGCCCTTGCTACAACCCAAACACTGTCAGAGCTCACTGTAACTATGCAGTTAACAGCTACTTCCAGAAAAAGGGTCAAGCACCATTGGCTTGTGACTTTGCAGGAGCAGCCACAGTTTCTGCATCAGATCCCAGCACTACAGGTTGTTCCTACCCTGCAAGCGCAAGCGCCGTAAGCACTGGCACAACTCCTGGGACAACCACACCTTCCATGGGCACTGGCACTGGCACTGGCACTGGCACTGGAACTCCTTCTTCCACAACAACAGGCTCCACCACTCCATTCAGCTCAACTCCTGGTGTGTTAGGAGGGATTGGCACTGGCATGGGCCCTTCTGGAGTTGGCACTAATTCAGATGACAGTCATGGTGGGCTTAGACTTGCAGACACCACTAGTTTGTTCTTAACATCATTCTTTTCAGGTTTGGTGATGATGGTATTGCTGTGGTGA 609 0.5107 MASLHLAVLLLLAFTASSSASWCVCKDGNEASLQKALDYACGAGADCNPIKQTGPCYNPNTVRAHCNYAVNSYFQKKGQAPLACDFAGAATVSASDPSTTGCSYPASASAVSTGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSDDSHGGLRLADTTSLFLTSFFSGLVMMVLLW* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5582 202 MobiDBLite consensus disorder prediction 108 152 - -
Lja1g5582 202 Gene3D - 15 116 - -
Lja1g5582 202 SMART X8_cls 21 104 IPR012946 -
Lja1g5582 202 Pfam X8 domain 22 91 IPR012946 -
Lja1g5582 202 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 192 - -
Lja1g5582 202 PANTHER BETA-1,3 GLUCANASE 1 192 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5582 Lja-Chr1 97620819 97626323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5582 18 116 Miscellaneous Gene Families AT2G16230 42.000 7.59e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5582 - - gmx:100812033 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5582 1 97620819 97626323 Lja4g2088 4 22442261 22446444 ECH
Lja1g5582 1 97620819 97626323 Lja1g5582 1 97620819 97626323 ECH