Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5526 ATGGCAGAAGAAACCGCACCGGAACTCGTAGATCCCAACACTCCCGCCGCCGCCACCACCACCACCGTAGACATGGACGTCGAAAGCGGCGCCGAACCCGACCACAAGCGTGAGAGGGAGGAAGAGGGTTCCCACGACGACGTCGTTGCGAAGAAGCAGAAGGTGGACGAGGAAAAATCGGTGGAAGAACAACGGTTGGAGAAGGTGGAAGGTGAAGGAGAAGAGCAAGAAGAAGAAGCAGAGAAGGAAGGTTCAGTTCCTGATCCCATCAAGTTGGGATTCAAAAGCTTCGCGTCTTCCTCGGAGATGTTCCATTACTTCTTCAACTTTCTTCATGCCTGGCCTCAATCTATCAATGTTAACGAGTACGAACATATGATGTTGTTGGAATTGCTTAAGAAAGGGCATGCAGAGGCTGATAGGAAGATTGGTGGAGGGATTCGCGCTTTCCAAGTCCGCAAGCATCCCGCCTTTAGTAGCAGGTGCTTTTTCCTAATCAGGGAGGACGGCTCTACTGACGATTTCAGCTTCCGAAAGTGTGTGGATCATATTCTTCCCTTGCCAGAAGATTTGCATGTGAAATCTGAGGCGAACAAGGCGCGAGGTGGCGGTGGAGGGGGAGGAAAGCATCATGGAGGAAAAGGGGGCAGAGGGAGGGGTGGGAGAGGTAGTGGGCGTGCTTATGGGAGAGGAGGAAAGGGGAGATATTGA 711 0.5246 MAEETAPELVDPNTPAAATTTTVDMDVESGAEPDHKREREEEGSHDDVVAKKQKVDEEKSVEEQRLEKVEGEGEEQEEEAEKEGSVPDPIKLGFKSFASSSEMFHYFFNFLHAWPQSINVNEYEHMMLLELLKKGHAEADRKIGGGIRAFQVRKHPAFSSRCFFLIREDGSTDDFSFRKCVDHILPLPEDLHVKSEANKARGGGGGGGKHHGGKGGRGRGGRGSGRAYGRGGKGRY* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5526 236 MobiDBLite consensus disorder prediction 1 88 - -
Lja1g5526 236 Coils Coil 52 79 - -
Lja1g5526 236 MobiDBLite consensus disorder prediction 28 71 - -
Lja1g5526 236 PANTHER PROTEIN EMBRYO DEFECTIVE 514 12 218 - -
Lja1g5526 236 Pfam Protein of unknown function (DUF3223) 110 181 - -
Lja1g5526 236 MobiDBLite consensus disorder prediction 197 236 - -
Lja1g5526 236 Gene3D - 86 184 - -
Lja1g5526 236 PANTHER - 12 218 IPR044673 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5526 Lja-Chr1 95389235 95391989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5526 - - gmx:100796421 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5526 1 95389235 95391989 Lja1g5526 1 95389235 95391989 ECH
Lja4g2086 4 22422955 22431139 Lja1g5526 1 95389235 95391989 PCT