Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4998 ATGTTGGCGGCATGTAGCCTGTGCGCGTGCCACATGGCATTCTCCGTCGTCACCTCCGCCAATGCCAGAATCCTCCGCTTCCGCTTCGAGCTGCAGACCAAGGCCAGTTCCCGACGGAGAACGCACCTCGTCACCGCCCACCTTTCCAACCATTTCTCCTTCGATTTCGGACTTGATTCTCAGAGTTTGAAGTCCATTCAAGTTCATGATGCGTCACAGTTGCCTTGGGTGGGTCCAGTTCCGGGTGATATTGCTGAAGTTGAGGCTTATTGTAGGATCTTTAGGAATTCTGAATGGCTTCATTCTGCGTTAATGGATGCGTTGTGCAACCCCTTGACTGGTGAATGTAGTGTTTCATATGAGGTTCAGGTTGACGAGAAACCCCTTCTGGAAGATAAAATAGTTTCGGTCCTCGGATGCATGGTTGCCCTTGTGAACAAAGGGAGGGAGGATGTTCTTAATGGAAGAGCTTCTGTTATGACTCCCTTCCTTGCCGATGGGGTTAGCACGATGGAGGAAACAATGCCGCCACTTGCTGTTTTCAGGAGTGAGATGAAAAGGTGTTGTGAGAGCTTGCATGTTGCTCTTGAGAATTATTTAATTCCTGGTGATTATAGAAGCTTGGATGTGTGGAGGAAACTTCAGAGACTGAAGAATGTCTGCTATGATTCCGGTTTTCCTCGCAGGGAGGATTATCCATGTCCTACACTATTTGCAAATTGGAGTCCTGTATATTTATTCACTTCGAAAGAGGATGTAGAGTCCAAAGAATCTGAAGCAGCTTTTTGGATGGGTGGGCAGGTAACAGAAGAAGGTCTAAAATGGTTACTGGATAAAGGGTATAAAACAATTATAGATCTCAGAGAAGAGACTGTAAAAGATCACTTTTATCAAACAGATTTGCATGATGCTATTTCATCTGGAAGTATTGAATTGGTCAAAATCCCTGTTGAGGTGAGGACTGCGCCTACAATGGAACAAGTTGAGAGGTTTGCATCTTATGTTTCAGATTGCAGCAAAAGACCGATTTATCTTCACAGCAAGGAAGGAGTTTGGAGAACATCTTCCATGGTCTCCAGGTGGAGGGAGTACATGACTCTCTCTGCATCACGGTATGTTTCTAATCAAGCAGTTACTTTCAATGACATGTTATTGCATTACGGAAATGAATCTGGGAAACTCAAGGACTCAATGATTGCTGAGAGATCCTCCCTGCAAAATGATACTGATTTGTTGCAAGAGAGTTTGGGTGCAACACATAATTCTATTGACTCATTTGACCCTTCAAAGAAGAATACTGAAAAAGTGCAAAGTAGTAAGGCCTTAAGTGGAATTACTCCTGATGATAGGACTTCATCACAAGCTACTGCTACTGATGGGGAAGGATCTTTTCTAAGTTTCTTCAGCAAAACTGTCCCTTTAGATGCTCAAGTTCCTCCTCATGATATCTTTTCCAAAAAGGAGATGTCAAGATTTTGGCAAAGTAGGAACATGCATACTAGAAGACTGCATGACGGAGTAAGTATCAGCAGTGGTAATAATCCTGAACCTAAAACTGTGGGTCCAGCTGAAATTTCCAATTGGTCAGATCATGTGGATGTTGGAGAGCCCCATACTACTGTTGGTAGAAATTGGAAGTTAGGGAATGTGAATACTTCCAGTTCTGTCAGGACAACAGTTAATGGGTTTAGTGAAAGGGAAATGTATAACAGGGCTGACGCTAATGACATTGATAATGCCACAACTAACTCTCAAAGGATTGGAGATGATGACAAGGCAAAGGAAGGCTTGGAACACCTTGAAAGAGACATGTGTGCATCTTCAACTGGAGTTGTAAGGGTGCAGTCAAGAAAGAAAGCAGAAATGTTCCTTGTACGAACGGATGGATATTCTTGCGCCAGAGAAAAAGTCACTGAATCTTCTTTGGCTTTTACTCATCCTAGTACCCAACAACAGATGCTTATGTGGAAATCCACCCCAAAGACTGTGTTATTGTTGAAAAAGCCTGGAGAGCGACTCATGGAAGAAGCTAAAGAGGTTGCTTCTTTTCTATATTACCAAGAGAAAATGAACGTTTTAGTGGAACCAGATGTGCATGATATATTTGCCAGAATTCCTGGCTTCGGATTTGTTCAGACCTTCTATAGTCAAGATACCTGTGATCTACATGAAAAAGTAGATTTTGTGGCATGTTTGGGGGGAGATGGTGTTATACTTCATTCTTCAAATCTATTCAGAGGTCCTGTGCCCCCTGTTATATCATTTAACCTCGGTTCCCTTGGTTTTCTGACTACTCACAGTTTTGAAGACTACAATCAGGACTTGCGACGAGTCATCCATGGAAATAATGCACAAGATGGTGTGTACATCACCCTCAGAATGCGTCTCCGATGTGAAATTTTTCGCAAGGGTAAAGCTATGCCTGGAAAAGTATTTGACATTCTCAATGAAGTTGTTGTTGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAATGTTACGAACGTGATAGACTTATAACCAAGGTACAAGGTGATGGAATCATTGTGGCCACCCCTACTGGAAGCACTGCCTATTCTACAGCTGCTGGAGGTTCCATGGTCCATCCAAACGTTCCCTGCATGCTATTTACGCCAATATGTCCACATTCACTTTCATTTAGACCGGTTATACTTCCAGATTCTGCTCAATTTGAGTTAAAGATACCAGAGGATGCAAGAAGCAACGCCTGGGTTTCATTTGATGGAAAGAGAAGGCAGCAACTTTCAAGAGGAGATTCTGTACGAATATCTATGAGTAAGCATCCGCTTCCAACTGTTAACAAGTTTGACCAAACAGGTGATTGGTTTCATAGTTTGATTCGCTGCCTAAATTGGAATGAAAGGCTTGATCAAAAGGCCCTATAA 2907 0.4272 MLAACSLCACHMAFSVVTSANARILRFRFELQTKASSRRRTHLVTAHLSNHFSFDFGLDSQSLKSIQVHDASQLPWVGPVPGDIAEVEAYCRIFRNSEWLHSALMDALCNPLTGECSVSYEVQVDEKPLLEDKIVSVLGCMVALVNKGREDVLNGRASVMTPFLADGVSTMEETMPPLAVFRSEMKRCCESLHVALENYLIPGDYRSLDVWRKLQRLKNVCYDSGFPRREDYPCPTLFANWSPVYLFTSKEDVESKESEAAFWMGGQVTEEGLKWLLDKGYKTIIDLREETVKDHFYQTDLHDAISSGSIELVKIPVEVRTAPTMEQVERFASYVSDCSKRPIYLHSKEGVWRTSSMVSRWREYMTLSASRYVSNQAVTFNDMLLHYGNESGKLKDSMIAERSSLQNDTDLLQESLGATHNSIDSFDPSKKNTEKVQSSKALSGITPDDRTSSQATATDGEGSFLSFFSKTVPLDAQVPPHDIFSKKEMSRFWQSRNMHTRRLHDGVSISSGNNPEPKTVGPAEISNWSDHVDVGEPHTTVGRNWKLGNVNTSSSVRTTVNGFSEREMYNRADANDIDNATTNSQRIGDDDKAKEGLEHLERDMCASSTGVVRVQSRKKAEMFLVRTDGYSCAREKVTESSLAFTHPSTQQQMLMWKSTPKTVLLLKKPGERLMEEAKEVASFLYYQEKMNVLVEPDVHDIFARIPGFGFVQTFYSQDTCDLHEKVDFVACLGGDGVILHSSNLFRGPVPPVISFNLGSLGFLTTHSFEDYNQDLRRVIHGNNAQDGVYITLRMRLRCEIFRKGKAMPGKVFDILNEVVVDRGSNPYLSKIECYERDRLITKVQGDGIIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQFELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSKHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4998 968 Pfam ATP-NAD kinase N-terminal domain 691 781 IPR002504 GO:0003951|GO:0006741
Lja1g4998 968 MobiDBLite consensus disorder prediction 527 546 - -
Lja1g4998 968 Pfam ATP-NAD kinase C-terminal domain 815 941 - -
Lja1g4998 968 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 262 368 IPR029021 -
Lja1g4998 968 PANTHER NAD KINASE 26 968 - -
Lja1g4998 968 Hamap NAD kinase [nadK]. 661 959 IPR002504 GO:0003951|GO:0006741
Lja1g4998 968 Gene3D - 650 960 IPR017438 -
Lja1g4998 968 MobiDBLite consensus disorder prediction 435 458 - -
Lja1g4998 968 Gene3D - 795 935 IPR017437 GO:0003951|GO:0019674
Lja1g4998 968 MobiDBLite consensus disorder prediction 420 458 - -
Lja1g4998 968 Gene3D Protein tyrosine phosphatase superfamily 254 386 IPR029021 -
Lja1g4998 968 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 664 963 IPR016064 -
Lja1g4998 968 PANTHER NAD/NADH KINASE FAMILY PROTEIN 26 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4998 Lja-Chr1 70107601 70113525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4998 K00858 - gmx:100791488 1518.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4998 1 70107601 70113525 Lja1g4998 1 70107601 70113525 ECH
Lja1g5827 1 104691654 104697873 Lja1g4998 1 70107601 70113525 PCT