Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4593 ATGGCCACGACTTCACCTCTGCTCATACCTCAACTCCACTTTCTATCTCCTCAACTCACCTTCAACCGCCGTCTTTCTCTCTCTAAACTCCCCCTCCTCTCTTCAACCACCACCAGAATCCGCGCCGTCGGTAAGGAACCGGCGTTGGCCGAGCGACTGAACGACGTAGAGTGGACCGGAAACGGAGTCGCCGGCTCCAATAGCAATGGCGCTGTGGATGGATACGTTAACGGCGATGGAAACGGCGTCGCGGCGGAAACGGAAACGAAAACGGAAGTTGAAGCTTCCATGATAAGCGAGGATGGGAGGAAGAGGAGGTTGGAGGAGATTGGGAAAGAGGATGCGTGGTTTAAGCAAACTGTGAAAGAATCGGTTCAGGTTGCAGTTGCACCTGGAGGTCGTTGGAGCAGGTTCAAGGGTTACTCTACAATACAGAGGACCTTGGAAATTTGGGGATTTGTTGTGAAGTTTATCTTTAAGGTTTGGCTGAGCAACCAGAAGTTTAGTTACAAAGGAGGAATGACTGAGGAAAAAAAGACCTTAAGACGGAAAACCCTTGCCAAGTGGCTGAAGGAAAGCATTTTGAGATTAGGTCCAACGTTCATTAAAATTGGCCAGCAATTCTCCACTAGGGTAGACATTCTTCCTCAAGAATATGTTGACCAGTTGTCTGAACTTCAGGATCAAGTTCCTCCATTTCCATCGGAGACTGCTATAGCTATTGTTGAAGAAGAGCTTGGAGCTCCTGTAAATGATATCTTTGACCAGTTTGATTATGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGTGCAAAATTGAAGGGACTGGAGGTTGTTGTTAAAGTGCAAAGGCCTGGTCTCAAGGGTCTTTTTGATATTGATCTTAAAAACCTGAGGGTTATTGCTGAATACCTTCAAAAACTTGATCCAAAATCTGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATACCAGGAGATTGATTACACAAAGGAGGCTGCTAATTCAGAATTGTTTGCAAGTAACTTTAAGGGCATGGATTATGTGAAAGTTCCTACAATATACTGGGATTATACCACGCCACAGATTTTGACAATGGAGTATGTTCCAGGGATTAAAATAAACAAAATACAAGCTTTAGATCAGCTGGGTGTTGATCGCAAAAGGTTAGGGAGATATGCGGTTGAGTCATACTTGGAACAAATTCTATCACATGGTTTCTTCCACGCTGATCCTCATCCTGGGAATATTGCAGTTGATGATGTCAATGGTGGAAGGTTGATCTTCTATGATTTTGGAATGATGGGAAGTATCAGTCCAAACATCCGAGAAGGTTTGCTTGAAACATTTTATGGAGTTTATGAGAAAGATCCCGATAAGGTTCTTCAAACAATGATTCAAATGGGCGTTCTTGTCCCTACTGGAGACATGACCGCTGTTAGGCGAACAGCACAATTCTTCCTTAACAGTTTTGAGGAGCGTCTGGCTGCACAAAGGAGGGAAAGAGAAGAAGCAACAGCTGAACTTGGATTCAAAAAACCATTAAGCAAGGAGGAAAAAATAATGAGGAAGAAACAACGTCTGGCTGCTATAGGCGAGGATTTATTATCCATTGCAGCAGACCAGCCCTTCCGATTTCCTGCTACGTTCACATTTGTTGTTAGAGCTTTCTCAGTATTAGATGGCATCGGAAAGGGCCTCGACCCACGTTTTGACATTACTGAGATTGCCAAGCCTTATGCTCTGGAGTTGCTAAGGTTTCGTGAAGCGGGGGCTGAGGTTATCCTAAAGGACTTTAGGAAGAGATGGGATAGACAATCTCAAGCATTTTACAACTTATTTAGACAGGCTGATAGGGTTGACAAGCTGGCTGCAATTATCCAAAGGCTGGAGCAAGGTGATCTAAAGCTCAGAGTTCGAACTTTAGAATCCGAGAGGGCATTCCAGCGCGTTGCCGCTGTCCAGAAGACTATAGGGAATGCAGTAGCTGCTGGAAGCCTCGTAAATCTTGCGACAATTTTGTATCTCAATTCAATTCGCGTGCCTGCAATTGCAGCATATGTATTCTGTGCATTCTTTGGTTTTCAAGTGCTCTTGGGCATTGTAAAGGTCAAGAAGCTAGATGAAAGGGAACGACTGATTACAGGGACCGCATAA 2184 0.4451 MATTSPLLIPQLHFLSPQLTFNRRLSLSKLPLLSSTTTRIRAVGKEPALAERLNDVEWTGNGVAGSNSNGAVDGYVNGDGNGVAAETETKTEVEASMISEDGRKRRLEEIGKEDAWFKQTVKESVQVAVAPGGRWSRFKGYSTIQRTLEIWGFVVKFIFKVWLSNQKFSYKGGMTEEKKTLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAIAIVEEELGAPVNDIFDQFDYEPIAAASLGQVHRAKLKGLEVVVKVQRPGLKGLFDIDLKNLRVIAEYLQKLDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANSELFASNFKGMDYVKVPTIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDPDKVLQTMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREREEATAELGFKKPLSKEEKIMRKKQRLAAIGEDLLSIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGAEVILKDFRKRWDRQSQAFYNLFRQADRVDKLAAIIQRLEQGDLKLRVRTLESERAFQRVAAVQKTIGNAVAAGSLVNLATILYLNSIRVPAIAAYVFCAFFGFQVLLGIVKVKKLDERERLITGTA* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4593 727 PANTHER ABC TRANSPORTER-LIKE PROTEIN 3 725 - -
Lja1g4593 727 CDD ABC1_ADCK3-like 226 474 - -
Lja1g4593 727 Pfam ABC1 atypical kinase-like domain 225 473 IPR004147 -
Lja1g4593 727 SUPERFAMILY Protein kinase-like (PK-like) 227 470 IPR011009 -
Lja1g4593 727 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 3 725 - -
Lja1g4593 727 Coils Coil 497 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4593 Lja-Chr1 60134401 60144122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4593 - - lja:Lj0g3v0083779.1 1372.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4593 1 60134401 60144122 Lja1g4593 1 60134401 60144122 ECH
Lja1g4593 1 60134401 60144122 Lja5g2786 5 55110447 55118940 PCT