Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4515 ATGGTGAGCAGAGGCTCCCACAACCTCTACACTTCTAGATTCCACACTAGAAAACTGTCTCCTAGCATCATCACTTTCTACACCATTTTGATTTTCGGTTTCTCCATCTTCGTCTTCTTCTTCTACGTCAGGAACACTATCATCGATGAAGATCAACCGCACCCTCTGCTTTCTCAACAATCTCTATCTCACCAGGTTCCAGAGCTACCTATGTATGATGAGAAACTTTGGGATCCTCCTTTCAGTCATGGCTTACACCAGTGTGTCAAACCGACTGCTAGATATAAAGGTGCCCAAGGAGTTGATCGCTATCTGACTGTGAGAAGTAATGGTGGACTAAATCAAATGCGAACTGGTATATCAGACATGGTGGCAGTGGCACATATAATGAATGCAACTTTAGTCATTCCTCAATTGGATAAACGTTCATTCTGGCAAGACTCAAGTGTATTTTCAGATATATTTGATGAGCTTCATTTCATTGAGTCCCTGAAAGGAGATATCAAGATTGTGAGGGAACTTCCCAAGAACTTGGAAGGTGCCCCCCGGGCCAGGAAACATTTCACTTCCTGGGCTGGAGTTGGTTACTATGAAGAAGTGGCAAGGTTATGGAACGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTGGACATCCAGAGACTGAGATGCCGTGCAATGTATCAGGCACTCCGATTTTCTCCTCCTATTGAGGATCTAGGAAAGAGGTTGGTGGATCGGTTGAGATCACGCTGGGGAAGATACATCGCTCTCCATCTCAGATATGAGAAAGATATGCTGTCTTTTACTGGCTGTGCATATGGTCTGACGGATGCAGAATCTGAAGAGCTGAGAGTTTTGAGGGAGAGTACAAATTATTGGAAAGTGAAAAAGATAAATGCAACAGAACAGAGAATTGGAGGATTTTGTCCGTTGACTCCAAAGGAGGTGGGTGTTTTTCTTCTAGCTCTCGGGTTTCCTCCATCAACACCAATATACATTGCAGCGGGGGAGATCTATGGTGGTAACACTCATCTTTCGGAGCTCTCCTCCCGTTTCCCTAATCTAGTCTTTAAGGAACACCTTGCAACTCCTGAAGAGCTGAAAGCTTTCACCAATCATGCATCTCAAAATGCTGCAGTTGATTACATAATCTCTATTGAGAGCGATGTATTTGTTCCGTCATATTCAGGAAATATGGCAAGGGCTGTTGAGGGACACCGCAGATTCTTAGGTCACCGCAAGACAATTAACCCAGACAGGAAAGGACTTGTTGAAATTTTTGATAGGCTGGAAACTGGAGACCTAAAAGAAGGAGAGCCACTGTCACATCTGGTGCAGCAGATGCACAAGAACAGGGAAGGAGCTCCAAGGAAAAGACAAGGCTCCCCACCAGGAATTAAAGGGCGAGCACGGTTTAGGACTGAAGAATCCTTTTACGAAGATCCATACCCTGAGTGTATATGTGGCTCTAGAAGCAAACTAGAAAGAACATGA 1524 0.4423 MVSRGSHNLYTSRFHTRKLSPSIITFYTILIFGFSIFVFFFYVRNTIIDEDQPHPLLSQQSLSHQVPELPMYDEKLWDPPFSHGLHQCVKPTARYKGAQGVDRYLTVRSNGGLNQMRTGISDMVAVAHIMNATLVIPQLDKRSFWQDSSVFSDIFDELHFIESLKGDIKIVRELPKNLEGAPRARKHFTSWAGVGYYEEVARLWNDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYQALRFSPPIEDLGKRLVDRLRSRWGRYIALHLRYEKDMLSFTGCAYGLTDAESEELRVLRESTNYWKVKKINATEQRIGGFCPLTPKEVGVFLLALGFPPSTPIYIAAGEIYGGNTHLSELSSRFPNLVFKEHLATPEELKAFTNHASQNAAVDYIISIESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVEIFDRLETGDLKEGEPLSHLVQQMHKNREGAPRKRQGSPPGIKGRARFRTEESFYEDPYPECICGSRSKLERT* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4515 507 MobiDBLite consensus disorder prediction 459 486 - -
Lja1g4515 507 CDD O-FucT_plant 104 425 IPR024709 -
Lja1g4515 507 PIRSF UCP009360 2 502 IPR024709 -
Lja1g4515 507 PANTHER O-FUCOSYLTRANSFERASE 38 7 502 - -
Lja1g4515 507 Pfam GDP-fucose protein O-fucosyltransferase 104 419 IPR019378 -
Lja1g4515 507 PANTHER OS02G0726500 PROTEIN-RELATED 7 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4515 Lja-Chr1 58826426 58832074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4515 69 498 Miscellaneous Gene Families AT1G22460 58.469 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4515 - - gmx:100810961 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3443 1 42951636 42957694 Lja1g4515 1 58826426 58832074 ECH
Lja1g4515 1 58826426 58832074 Lja1g4515 1 58826426 58832074 ECH