Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3443 ATGGCGTTTCAGCGGCGGCGCCACCACCATTACCAACGCTGCGGCCGTATGATTCCACTGATCTCCGCCGTCGCCGCCGCTCTACTCTTTCTCTTCGCTCTCCTTTCCTTTTTAGCTCCTACTCCGATCGATACTGATCATATGCACCACCACAGACAACAATACGCCTCGTTCAATGTTCAAGCGGATGATGATGCGATTGGAAATCCTGTCGATGACGCGATTGGAAATCCTGTGTTTCGCATTCCGAGTGACGGAGGGAAGCTAGGTCGAGATGTGTGGAGTTCTAGAAATTCGGAGCACTTCCACGGCTGCAGCAATGCCAGCAGCAAGTTTCCAAAAGCTCGAGAGATTACGCATCCGAATCGGTATTTGTTGATTGCAACCAGTGGAGGCTTGAATCAACAAAGAACTGGGATAACAGATGCTGTTGTTGCTGCGCGAATTTTGAATGCGACTCTTGTAGTGCCAAAATTGGATCAACGATCTTACTGGAAAGATTCTAGTAACTTTTCAGAGATCTTTGATGTTGATTGGTTTATATCGCATCTGTCCAAAGATGTCCAAATTATCAAGCAACTCCCAAGTAAGGGTAAGAAACCATTATCTGCATACAGCATGCGTGTTCCAAGGAAGTGTAGTGAAAGATGCTATATAAATCGTATATTACCCGTGCTCCAGAAAAAGCGTGCTGTTCAGCTCAACAAGTTTGACTACAGACTTGCAAATAGGTTGGATACAGAGTATCAGAAGTTGAGATGTAGAGTTAATTACCACGCTTTGAAATTTACCAACCCTATACTAACAATGGGTGAAAAATTGGTCCATCGGATGAGGATGAAAAGCAAGCATTATATTGCACTGCACCTCAGATATGAACCTGATATGCTTGCATTTTCTGGATGTGATTATGGTGGAGGCGAGAAGGAGCAGAAGGAACTGGGGGCAATAAGGAGGAGGTGGAAGACACTACATAAAAGCAATCCTGATAGGCAAAGGAGGCAGGGAAAATGCCCATTAACCCCAGAAGAAGTTGGTCTCATGCTAAGAGCCTTGGGCTATGGTTCTGAGGTTCATATTTATGTTGCATCTGGGGAAGTTTATGGTGGGGAAGAAACATTGGCACCTCTCAAAGCTTTGTTTCCTAATTTCCATACAAAAGAAACCATTGCTACCAAGGAAGAACTAGGACCATTTTCTTCATTTTCTTCTCGCATGGCTGCACTCGACTTCATTGTTTGTGATGAAAGTGATGTTTTTGTGACCAATAACAATGGTAATATGGCTAAAATATTAGCTGGGCGAAGGAGATACTTTGGGCACAAACCAACCATTCGTCCAAATGCTAAAAAAATCTACCGGTTGTTCTTGAGCAGAAGTAATATGACTTGGGAAGTTTTTGCTTCTGGTATCCGTACTTTTCAGAAAGGCTTTGTGGGGGAGCCAAAGGAGGTTAGACCAGGTAGAGGCGGGTTTCATGAGAATCCACATACCTGTATATGTGAAGATTCTGGGGCTAAAGTGGACAAAAATTCTGGACCAAGAAAATTTGGGAAGGATAGTATACCCCAGAAAAATGTAGCAAACGAAGAGGTTGATGTTGAAGATGACGATGACGATGACAATGATATGAATGAAATACCAGAGAAGGATATGTTCAATGAAACAACGTCGGACTATGAAACTCTCAACTTTGAGGATCCTGAGTTGGAGGAAATTGTGTCAGATTAG 1731 0.4339 MAFQRRRHHHYQRCGRMIPLISAVAAALLFLFALLSFLAPTPIDTDHMHHHRQQYASFNVQADDDAIGNPVDDAIGNPVFRIPSDGGKLGRDVWSSRNSEHFHGCSNASSKFPKAREITHPNRYLLIATSGGLNQQRTGITDAVVAARILNATLVVPKLDQRSYWKDSSNFSEIFDVDWFISHLSKDVQIIKQLPSKGKKPLSAYSMRVPRKCSERCYINRILPVLQKKRAVQLNKFDYRLANRLDTEYQKLRCRVNYHALKFTNPILTMGEKLVHRMRMKSKHYIALHLRYEPDMLAFSGCDYGGGEKEQKELGAIRRRWKTLHKSNPDRQRRQGKCPLTPEEVGLMLRALGYGSEVHIYVASGEVYGGEETLAPLKALFPNFHTKETIATKEELGPFSSFSSRMAALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKKIYRLFLSRSNMTWEVFASGIRTFQKGFVGEPKEVRPGRGGFHENPHTCICEDSGAKVDKNSGPRKFGKDSIPQKNVANEEVDVEDDDDDDNDMNEIPEKDMFNETTSDYETLNFEDPELEEIVSD* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3443 576 PANTHER O-FUCOSYLTRANSFERASE 16 5 576 - -
Lja1g3443 576 PIRSF UCP009360 2 508 IPR024709 -
Lja1g3443 576 CDD O-FucT_plant 124 444 IPR024709 -
Lja1g3443 576 MobiDBLite consensus disorder prediction 511 559 - -
Lja1g3443 576 Pfam GDP-fucose protein O-fucosyltransferase 124 438 IPR019378 -
Lja1g3443 576 PANTHER O-FUCOSYLTRANSFERASE 16 5 576 - -
Lja1g3443 576 MobiDBLite consensus disorder prediction 531 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3443 Lja-Chr1 42951636 42957694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3443 124 455 Miscellaneous Gene Families AT1G22460 49.702 2.72e-99 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3443 - - gmx:100817698 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3443 1 42951636 42957694 Lja1g4515 1 58826426 58832074 ECH
Lja1g3443 1 42951636 42957694 Lja1g3443 1 42951636 42957694 ECH