Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4511 ATGGTGAGGTTTTTAGGATTGACTCGCGGGGTGGCGGATGAACCGAGGGAAATTGAATCGAGGTCCAATCTGACGAGTGAGTCCAGTGAAAATGGTTGGCTCATCAGATTCTTTGACTCGTCGTTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGAGCATTCCGGGGTGCGTGATTATCTCTGTAATAGAATGTATACACTTCCTTTGCAGGGAGTTGAGGGTTACTTGTTCCAAGTGTGTTACATGATGATACACAAGCCGAGCCCGTCTTTGGATAAGTTTGTCATAGATGTGTGCTCCAAGTCGCTTAAGATTGCTTTGAAGGTGCATTGGTTCTTGTTGGCGGAGCTTGAGGACACTGATGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGCCAGATTGGAGCCACCTTGATGGGTGAGTGGCCACCTCTGATAAAGCCTCAAAGCGCAGCTTCGAGCCCTGGAGGCAAGAACCAAGTTTTGAATAAGATATTTTCGTCAAAACAGCGATTTCTGTCGCTAACATCTTCCCCGCTTACGCAGAGATCTTTGTCATTCTCCCCTTCTTCAGGAAACAATTTGCAAGAGGATGGTGGTCAGCAGTCTCCTGAAGAGAACAAGTTATTTAGGAAATTTATGCCAGGTCCAAAGGTTAGAGATGCTTTGCTTTTCAGGAAATCAGTAGATAAAGATGATGATGACTCTGAAAAGGATGGTTTTTTCAAGAGGCTTTTAAGAGATAGCAAAAGTGATGATGAGTTCGGCCTGAAAATTCGAGATCTCTTTCGCAAGTCGTCTGAGAAATATGATGAAGACTCTGAAAAGGATAATTTCTTTAAAAGGCTCCTAAGGGATAGAGGGGATGATGAAGACTCTGAAAAGGATAGTTTCTTTAGAAGGCTCTTAAGGGATGGTAAAGGTGAAGATGAGGATTTGGCCTCTAGTTCAGAGGGATTCTTCAAGAGATTGTTTCGCGATAGCAAGAATGATCCTGAGGATAAAACACACGCTAATAAAAGAATGGAAGATGAAGACAAAGAGGGATTCTTCCGTAAGTTTTTCAGAGAGAAATTTGAAGATAAGAAGGATGCAAATGATGGAAATGTTGCTACTTCTGAAGAGAAGTGTAAGTCTGCTGAAGAGGAAGAAAGAGAAGGGTTTTTCCGGAAATTGTTCAAGGATAAATTTGAAGATAAAAAAGATAGCAATGATAAAATGGAGGATGGTACTACCATTGTTGAGGAAGAAGAGCCTTCTGAGTTTTCTTTGTTCAAAAGACTTTTTCGTGTGCACCCTGAAGAGGATAAAAGTAGTCCAGCAAATGAAAACGACAATAGTGGTTTATTTGAAAGTAGTCCAGGCACGGAAAACTTTTTCCGCAAATTGTTTAGAGATCGTGACCGCTCAATTGAAGATTCAGAGCTATTGGGGTCAAAAAAGGAGAAAGAGAAGCATCCTGGATCGCTGAAGCAGCAAAATGAGAAATCAGGAACAAAGCCTCCACTTCCAATTAATACATTGCAGTTCCGGAAAGGAGCTTACCATGAGTCATTGGATTTTGTGCTTGCATTATGTGAGACATCATTTGGGTTAGTGGATGTATTTCCAGTTGAAGATCGCAAACGTGCTCTCCATGAGTCACTTGCAGAAATCAATTTACATTTAACAGAAGCTCAGAATACTGGAGGCGTTTGTTTTCCATTGGGAAAAGGCATGTACCGTGTGCTTCATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCGCCTTACATGATTTGCGTTGAAGTTTTGAGATGTGAAATGCCAAGCAATTCCCGGGAGGCATCCAGTTCCCAGAAACTTTCTAAAGGTGGAATTCCTTTGGCAAATGGAGATGCTTTCTTACAAAAACCACCCCCTTGGGCTTATCCATTACAGACAGCACAGGAGGTGTATCGTAATAGTAACGATAGAATGTCCAAATCAACTGCTCAGGCTATTGACCAGGCAATGAACCATGCTTCTGGGTCAAAAATAAAATTTGTTAGTCTGGATCTTTCTGTGGAAGCACATTCACATGGTCAACTGGAGAAGACTGAAGTGGATCTACGTGGTAGCAGTCAGCATTGTGCTTCAATTCATAGAGACAGTATACAAGAAATGACAAGCCCAAGACATGACAGTGATGTAGATTGGGTGCGGGTAGTGTTGAAAGCTGATCCTGGCATTAGAATGGAAGATATTGAGGATCAGGCACCACGACGGCGGAAGGAACATCGTCGTGTTCCAAGCACAGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGGGAAGCACCTCTTGGACTCCCTTTGAAAGGTGCTGGTCAAGATTCATCAGATGCCCAACCAAGGACTGATGGAATTACTCCCAAAGCCAGTGATGCCTTGTCTGGTGAACTTTGGGAGGTAAAGAAAGAGAGGATACAGAAGGCTTCTATACATGGGAATGTGCCGGGTTGGGACTTGCGATCTGTTATTGTAAAGAGTGGGGATGACTGTAGGCAGGAGCATCTGGCAGTTCAACTTATTTCACACTTCTATGATATTTTTCAAGAAGCGGGTCTACCTCTCTGGCTGCGCCCTTATGAAGTGTTATGTACTTCTTCTTACACTGCTCTTATTGAAACAATTCCAGATACGGCTTCTCTACATTCTATCAAAAGTAGATACCACGGCATATCAAGTTTACGTGAATTCTTTATTGCCAAGTATCAAGAAGATTCTCCGAGTTTTAAACTTGCTCAGAGGAACTTTGTTGAAAGTATGGCTGGATATTCCCTGGTTTGCTACCTTCTGCAGGTGAAGGATAGGCATAATGGGAACCTCTTATTGGATGAAGAAGGTCATATTATACATATTGATTTTGGGTTCATGCTTTCTAATTCACCTGGTGGTGTTAATTTTGAGAGTGCACCTTTTAAATTAACTCGGGAGCTTCTTGAGGTCATGGATTCTGATGCTGAGGGCATTCCAAGTGAGTTTTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACTTGCCGTAAGCATGCTGAGCGTGTTATTCTTCTTGTTGAAATGTTGCAGGACTCTGGTTTCCCTTGCTTTAAAGGTGGCTCACGGACAATACAGAACCTAAGAAAGCGATTCCATCTCAGTTTAACAGAAGAGCAATGTGTATCTTTGGTGCTTTCACTTATTAGTAGCAGCCTGGATGCATGGCGAACTCGTCAGTATGATTATTACCAGAAGGTTTTGAATGGAATATTATGA 3312 0.4221 MVRFLGLTRGVADEPREIESRSNLTSESSENGWLIRFFDSSFFCEWIAVSYLYKHEHSGVRDYLCNRMYTLPLQGVEGYLFQVCYMMIHKPSPSLDKFVIDVCSKSLKIALKVHWFLLAELEDTDDNEGISRIQEKCQIGATLMGEWPPLIKPQSAASSPGGKNQVLNKIFSSKQRFLSLTSSPLTQRSLSFSPSSGNNLQEDGGQQSPEENKLFRKFMPGPKVRDALLFRKSVDKDDDDSEKDGFFKRLLRDSKSDDEFGLKIRDLFRKSSEKYDEDSEKDNFFKRLLRDRGDDEDSEKDSFFRRLLRDGKGEDEDLASSSEGFFKRLFRDSKNDPEDKTHANKRMEDEDKEGFFRKFFREKFEDKKDANDGNVATSEEKCKSAEEEEREGFFRKLFKDKFEDKKDSNDKMEDGTTIVEEEEPSEFSLFKRLFRVHPEEDKSSPANENDNSGLFESSPGTENFFRKLFRDRDRSIEDSELLGSKKEKEKHPGSLKQQNEKSGTKPPLPINTLQFRKGAYHESLDFVLALCETSFGLVDVFPVEDRKRALHESLAEINLHLTEAQNTGGVCFPLGKGMYRVLHIPEDEAVLLNSREKAPYMICVEVLRCEMPSNSREASSSQKLSKGGIPLANGDAFLQKPPPWAYPLQTAQEVYRNSNDRMSKSTAQAIDQAMNHASGSKIKFVSLDLSVEAHSHGQLEKTEVDLRGSSQHCASIHRDSIQEMTSPRHDSDVDWVRVVLKADPGIRMEDIEDQAPRRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRTDGITPKASDALSGELWEVKKERIQKASIHGNVPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYHGISSLREFFIAKYQEDSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCRKHAERVILLVEMLQDSGFPCFKGGSRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQKVLNGIL* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4511 1103 Pfam Phosphatidylinositol 3- and 4-kinase 842 1049 IPR000403 -
Lja1g4511 1103 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 845 859 IPR018936 GO:0016301
Lja1g4511 1103 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 939 959 IPR018936 GO:0016301
Lja1g4511 1103 MobiDBLite consensus disorder prediction 368 390 - -
Lja1g4511 1103 PANTHER BNAA02G34040D PROTEIN 6 257 - -
Lja1g4511 1103 PANTHER PHOSPHATIDYLINOSITOL KINASE 292 1103 IPR015433 GO:0046854|GO:0048015
Lja1g4511 1103 MobiDBLite consensus disorder prediction 188 208 - -
Lja1g4511 1103 SMART pi3k_hr1_6 842 1101 IPR000403 -
Lja1g4511 1103 MobiDBLite consensus disorder prediction 479 496 - -
Lja1g4511 1103 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 820 1088 IPR000403 -
Lja1g4511 1103 PANTHER PHOSPHATIDYLINOSITOL KINASE 263 328 IPR015433 GO:0046854|GO:0048015
Lja1g4511 1103 PANTHER PHOSPHATIDYLINOSITOL KINASE 6 257 IPR015433 GO:0046854|GO:0048015
Lja1g4511 1103 SUPERFAMILY Protein kinase-like (PK-like) 564 1097 IPR011009 -
Lja1g4511 1103 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Lja1g4511 1103 PANTHER BNAA02G34040D PROTEIN 292 1103 - -
Lja1g4511 1103 PANTHER BNAA02G34040D PROTEIN 263 328 - -
Lja1g4511 1103 Gene3D - 688 895 - -
Lja1g4511 1103 MobiDBLite consensus disorder prediction 439 459 - -
Lja1g4511 1103 MobiDBLite consensus disorder prediction 785 810 - -
Lja1g4511 1103 Gene3D - 900 1101 IPR036940 GO:0016301
Lja1g4511 1103 MobiDBLite consensus disorder prediction 405 424 - -
Lja1g4511 1103 SUPERFAMILY ARM repeat 54 125 IPR016024 -
Lja1g4511 1103 MobiDBLite consensus disorder prediction 188 209 - -
Lja1g4511 1103 MobiDBLite consensus disorder prediction 329 348 - -
Lja1g4511 1103 CDD PI4Kc_III_beta 811 1103 - -
Lja1g4511 1103 MobiDBLite consensus disorder prediction 479 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4511 Lja-Chr1 58712594 58723919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4511 1 1102 Lipid Metabolism Gene Families AT5G09350 67.299 0.0 1518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4511 K19801 - gmx:100781715 1828.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4511 1 58712594 58723919 Lja1g4511 1 58712594 58723919 ECH
Lja4g0602 4 4974607 4982650 Lja1g4511 1 58712594 58723919 PCT