Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4286 ATGGCTGATAGAATGGAAGAACAAGAAACAGAACAAGAGAAAACAACAAGAAGAAAGATGAAGAAGATCCTTCTCATAATAAACTGTGCCTTGTTAGCTCTAGGCACCAGTGGTGGTCCCCTCATCATGCGTCTCTACTTCATCCACGGCGGCAAACGTGTCTGGCTCTCCGCCTTCCTCGAAACCGCCGGATTCCCCCTCATGCTGCCACCCCTCGCCGCCGCATACATCTACCGCCGCCGCCAGAGCAAAAAAACATCATCAGCGGCGGTCATATCGATGAAGCCTCGTTTGTTTCTTGCTGCAGCTGTCATCGGAACACTCACCGGCGTCGATGACTACCTCTATGCCTACGGCGTGGCGCGGCTCCCGATTTCCACCTCCGCCCTCATCATCGCCTCTCAGCTGGCCTTCACCGCCGTCTTTGCCTTCCTCCTGGTGCGGCAGAAGTTCACTGCTTACAGTATAAACGCCGTCGTGTTACTCACCGCCGCTGCCGGGGTTCTTGCCATGCACGCCAGCGGTGACCGCCCCGCCGGCGAGTCATTCAAGCAGTACGTTGTCGGTTTCGTGATGACCCTCGGCGCCGCTGCATTGTACGGGTTTGTTCTGCCCCTCACGGAATTGGTGTACAAAAAGACCAAACAAATCACATACTCTCTGGTCATGGAGTTTCAGTTTGTTATGTGCTTCTTTGCTTCTCTTGTTTGCTGTATTGGGATGATCATCGACAATGACTTCAAGGTGATTCCAAGGGAAGCGAGGAATTTTGGGCTTGGAGAATCCATGTACTATGGTGTGCTAGTGTTGGGTGCGTTTATGTGGCAGGCTTTTTTCTTGGGAGCAATAGGGGTGATATTTTGTTCATCGTCTCTGCTTTCTGGGATTTTGATTGCTGTGTTTCTGCCAGTAACTGAAGTACTGGCGGTTATTTTCTACAAGGAGAAGTTTCAAGCGGAGAAGGGGGTTTCTTTGTTTCTCTCAATTTGGGGTTTTGTGTCTTACTTTTATGGTGAGATCAAACATGCTAAGAAAGTGAAGAGGAACTCAGAAACAGAGTTGTCTCAAATTAATGTTCCTGATTTATGA 1089 0.4977 MADRMEEQETEQEKTTRRKMKKILLIINCALLALGTSGGPLIMRLYFIHGGKRVWLSAFLETAGFPLMLPPLAAAYIYRRRQSKKTSSAAVISMKPRLFLAAAVIGTLTGVDDYLYAYGVARLPISTSALIIASQLAFTAVFAFLLVRQKFTAYSINAVVLLTAAAGVLAMHASGDRPAGESFKQYVVGFVMTLGAAALYGFVLPLTELVYKKTKQITYSLVMEFQFVMCFFASLVCCIGMIIDNDFKVIPREARNFGLGESMYYGVLVLGAFMWQAFFLGAIGVIFCSSSLLSGILIAVFLPVTEVLAVIFYKEKFQAEKGVSLFLSIWGFVSYFYGEIKHAKKVKRNSETELSQINVPDL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4286 362 Pfam Purine nucleobase transmembrane transport 23 345 - -
Lja1g4286 362 PANTHER PURINE PERMEASE 10 358 - -
Lja1g4286 362 PANTHER OS09G0467300 PROTEIN-RELATED 10 358 IPR030182 GO:0015211|GO:0016021
Lja1g4286 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 94 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4286 Lja-Chr1 55182959 55184799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4286 20 348 Organic Solute Cotransporters AT1G28220 60.303 8.50e-149 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4286 - - gmx:100803818 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4286 1 55182959 55184799 Lja1g4286 1 55182959 55184799 ECH
Lja1g6001 1 110842491 110844479 Lja1g4286 1 55182959 55184799 PCT