Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4044 ATGGCGGACTCACTGTCGGTCCACATCTATGATCATCTTCCGTCCAAGGAACATCTTATCAGAACTCGTTATGGTTCTGTTTCTGTTGCTGTGTATGGAGACCAGGACAAACCAGCTCTTATTACTTACCCTGATTTGGCTTTAAATTATGTGTCCTGCTTTCAGGGGCTATTGTTTTGTCCGGAAATTGGTTCATTGCTGCTCCACAATTTCTGCATATATCAAATTAGTCCACCTGGGCATCAGTTAGGAGCCGGTGCAATTGATCCAGATGATCCACTTCTCTCTGCTGATGACTTAGCTGATCAATTAGCTGAAGTACTCAACTTTTTTGGTCTTAGTGCAGTCATGTGTATGGGAGTAACGGCTGGAGCTTACATTCTTACCTTATTTGCTATGAAGTATAGAGAACGTGTTCTTGGTTTGATACTTGTTTCTCCTCTTTGTAAAGCACCATCTTGGACTGAATGGTTGTACAACAAGGTCTTGTCGAATTTACTCTACTTTTATGGCATGTGTGGGGTGGTAAAAGAAATATTGCTAAAGCGATACTTTAGTAAGGAAGTTCGAGGCAGTGGTAATTTGCCAGAGTTGGATATAGTTCAAGCATGCCGAAGGTCCTTAGATGAGAGGCAGAGTTTGAATGTGTGGCGGTTCCTTGAAGCTATTAATGGGAGATCTGACATAAGTGAAGGATTGAGAAAATTGCAGTGTCGCTCACTAATTTTTGTTGGGGACATGTCTCCTTTTCACTCTGAGGCTCTCCACATGAATTCTAAGTTAGATAGACGATTTAGTGCCTTGGTCGAGGTTCAAGCTTGTGGGTCGATGGTAACAGAGGAGCAACCCCATGCGATGCTAGTACCAATGGAGTACTTTCTCATGGGATATGGTTTGTATAGACCATCCAAACTAAGTGTTAGCCCAAGAAGTCCCTTGAGTCCATCTTGCATTTCTCCTGAGCTTTATTCACCAGAGAGTATGGGTTTGAAATTGAAACCAATTAAAACACGAATTTCTGCGGAAATTTAG 1032 0.4215 MADSLSVHIYDHLPSKEHLIRTRYGSVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFCPEIGSLLLHNFCIYQISPPGHQLGAGAIDPDDPLLSADDLADQLAEVLNFFGLSAVMCMGVTAGAYILTLFAMKYRERVLGLILVSPLCKAPSWTEWLYNKVLSNLLYFYGMCGVVKEILLKRYFSKEVRGSGNLPELDIVQACRRSLDERQSLNVWRFLEAINGRSDISEGLRKLQCRSLIFVGDMSPFHSEALHMNSKLDRRFSALVEVQACGSMVTEEQPHAMLVPMEYFLMGYGLYRPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISAEI* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4044 343 PANTHER PROTEIN NDL2 3 342 - -
Lja1g4044 343 Pfam Ndr family 17 301 IPR004142 -
Lja1g4044 343 Gene3D alpha/beta hydrolase 8 296 IPR029058 -
Lja1g4044 343 PANTHER N-MYC DOWNSTREAM REGULATED 3 342 IPR004142 -
Lja1g4044 343 SUPERFAMILY alpha/beta-Hydrolases 18 294 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4044 Lja-Chr1 51235203 51238407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4044 - - gmx:100804729 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4044 1 51235203 51238407 Lja1g4044 1 51235203 51238407 ECH
Lja1g4044 1 51235203 51238407 Lja5g3020 5 59158198 59162868 ECH
Lja5g3020 5 59158198 59162868 Lja1g4044 1 51235203 51238407 PCT