Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3675 ATGGAAGTTGAATCCCGTACTAGTGCAGTTGCAAGTGTTCTTCTGGACGATGATGGGAGACCAAAAAGAACTGGGACTGTGTGGACTGCATGTGCACATATCATAACGGCAGTGATTGGGGCAGGGGTGTTGTCTCTAGCTTGGGCCATGGCACAATTGGGTTGGATCCTTGGCGTATCTTGCATCCTTATCTTTGCTGGTGTTACGCTCTACACTTCCAATCTTCTTGCTGATTGTTATCGTTCACCTGATCCTGTTACTGGCAAGAGAAACTACACTTACATGGAGGCAGTGAAAACTCACTTAGGTGGGAAAAGTTACGTGTTTTGTGGATGGGTCCTGTATTGCAACCTTGCTGGGTTTGTGATTGGCTTCACAATTACTACATCTAATAGTATGGTGACAATACTGAAAAACAATTGCTTCCATAAGAATCGGATTGGAGCTTCATGCCGTTTTTCTAATAATGCATACATGATTGGTCTTGGAGTCATTGAAATTATATTGTCTCAAATCCCTGATTTTCACAACCTGGCTTGGCTCTCTATCTTAGCAACTATCATGTCTTTTGGGTACGCCACCATTGGTGTTGGACTTTCTCTTGCAACCATTATCCAAGGGAAGGGAAGGAGTACCTCTTTTTGGTGGAGCGGCAATGATCATAGTTCAGGAGAAAGATTGTGGAACATGCTAGTTGCAATTGGAGATGTTGCACTTGCCAGTGCCTATACTCAAATTGGTATAGATATACAGGATAGCTTAAAGTCATCACCTCCAGAAAATAAAGTGATGAAGATGGCAAATACGATAGGTATATTCACCATGACAATCATCTTCCTCTTGTCTGCTTCCACTGGATATGCTGCATTTGGTTCAGGCACTCCTGGCAACATTCTCATGAGCTCTGGGTTTCACAATCCTTTCTGGCTAGTGGACTTGGCCAATGTCGCAATTATAGTGCATCTTGTTGGAGCATATCAGATAGTAATCCAACCTGTTTACCGTGTAATTGAGACCTTGGCTAGCCAATATTGGCCAAACTCAAGTTTTGTGACAAGGGATCACCCTATGAGCATTTGCAACATGAAATTCAGCATCAATTTCTTCAGGCTTGTTTGGAGGACCACATTTGTGGTAGTGGTGACTGTGCTGGCTATGGCAATGCCCTTTTTCAATGACATGATTGCCCTTCTTGGCGCTGTTGGGTTCTGGCCTTTGGTGTATTTTCCAGTGGAGATGTACATTGTGAAACAGAACATCAGAAAAGGAACAACAAGATGGTTTGGGCTTCAAATGTTGAGCCTTGTCTGCTTGATTGTGTCGTTGGCTGCAGCATGTGGAGCTATTCATGGTTTGGGTCAAGCAGTTGGAAAATACAAACCTTTTATGTATAAGGAATAG 1401 0.4311 MEVESRTSAVASVLLDDDGRPKRTGTVWTACAHIITAVIGAGVLSLAWAMAQLGWILGVSCILIFAGVTLYTSNLLADCYRSPDPVTGKRNYTYMEAVKTHLGGKSYVFCGWVLYCNLAGFVIGFTITTSNSMVTILKNNCFHKNRIGASCRFSNNAYMIGLGVIEIILSQIPDFHNLAWLSILATIMSFGYATIGVGLSLATIIQGKGRSTSFWWSGNDHSSGERLWNMLVAIGDVALASAYTQIGIDIQDSLKSSPPENKVMKMANTIGIFTMTIIFLLSASTGYAAFGSGTPGNILMSSGFHNPFWLVDLANVAIIVHLVGAYQIVIQPVYRVIETLASQYWPNSSFVTRDHPMSICNMKFSINFFRLVWRTTFVVVVTVLAMAMPFFNDMIALLGAVGFWPLVYFPVEMYIVKQNIRKGTTRWFGLQMLSLVCLIVSLAAACGAIHGLGQAVGKYKPFMYKE* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3675 466 PANTHER OS05G0424000 PROTEIN-RELATED 14 457 - -
Lja1g3675 466 Pfam Transmembrane amino acid transporter protein 23 449 IPR013057 -
Lja1g3675 466 PANTHER ACID TRANSPORTER, PUTATIVE-RELATED 14 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3675 Lja-Chr1 45865038 45871218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3675 3 462 Organic Solute Cotransporters AT1G10010 52.371 1.38e-175 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3675 K24917 - gmx:100804643 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3675 1 45865038 45871218 Lja1g3675 1 45865038 45871218 ECH
Lja1g3675 1 45865038 45871218 Lja1g5233 1 78310103 78317013 PCT