Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3096 ATGGTAAGTGTAATGGCGAAGGAAGAAGTGTCTGAGTTTCTCGGTTGCGTTCCTCTGCTGCAGAGGCTTCCTAGCTTGTCTGTAAGGAAGATATCTGAACTCGTTGTTGTCAAACACTATGAGCCAGGAGAGTATGTTGTCCGTGAGGGTGAACCCGGGGATGGTCTTTACTTCATTTTGGAGGGAGAGGCAGAAGTTGTTGGATCTGTTAGTGCTGATGACGAAAATCATCCCGAGTTTCAATTGAAAAGATATGATTATTTTGGTTTCGGTTTATCAAATGCAGTTCATCCTGCTGATGTCGTAGCTTTGACTAAGCTATCATGCTTAGTGTTGCCACTTGAGCACTCAGCACTGCTACAGCCAAAGTCTATCTGGAGTGCCGAAAAGTCTGTTGAAACATGCTCACCTGTGGAGAATATATTGCATTTGGATCCCATAGAGGTAGATATCTTCCGAGGAATCACCCCTCCAGATGCTCCAAAATTTGGGAAGGTGTTTGGGGGACAGTTAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAACTTGTTCATAGCTTGCATGCCTATTTTCTTCTTGTGGGGGATTTTAACATACCAATTATTTATCAAGTTAGTCGTCTCCGTGATGGGAAGAGCTTTGCCACAAGGAAAGTGGATGCAGTTCAAAAGGGAAATGTTATATTCACGTTACTGGCTTCATTTCAGAAAGAAGAACTAGGGTTTGAGCATCAGGAAGCATCTATCCCATCTGTCCCTGCTCCAGATGCTCTTCTATCAATGGAAGAGTTACGAGAGCAACGTTTAACTGACCCTCGTCTTCCTAGAACTTACCGGAACAAAGTTGCTACTGCTGAATTCATTCCATGGCCCATAGAGATACGGTTCTGTGAACCGAAAGCATCAACAAATCAGACTAAATCTCCTCCTAGTTTGAGATACTGGTTTCGAGCAAAAGGAAAACTGTCTGATGATCAGGCCTTGCATCGTTGTGTGGTTGCATATACTTCAGATCTAATATTTCTTCAAGTAAGTGTGAATCCCCATCGTCGTAAAGGCTTAAAGGCACGTGCTGTGAGTCTGGACCACTCCGTGTGGTTTCACAGACCTGTAAGAGCTGATGACTGGATACTATTCGTGATCTTTGCTCCTACTGCCTCTAATGCTCGTGGCTTTGTTACTGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGTCTAATGAGGAAGATTAGTCCCGAAAATCCAGCGTTCAAATCCAAGTTGTGA 1302 0.4378 MVSVMAKEEVSEFLGCVPLLQRLPSLSVRKISELVVVKHYEPGEYVVREGEPGDGLYFILEGEAEVVGSVSADDENHPEFQLKRYDYFGFGLSNAVHPADVVALTKLSCLVLPLEHSALLQPKSIWSAEKSVETCSPVENILHLDPIEVDIFRGITPPDAPKFGKVFGGQLVGQALAAASKSVDCLKLVHSLHAYFLLVGDFNIPIIYQVSRLRDGKSFATRKVDAVQKGNVIFTLLASFQKEELGFEHQEASIPSVPAPDALLSMEELREQRLTDPRLPRTYRNKVATAEFIPWPIEIRFCEPKASTNQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYTSDLIFLQVSVNPHRRKGLKARAVSLDHSVWFHRPVRADDWILFVIFAPTASNARGFVTGQMFNQKGELLVSLVQEGLMRKISPENPAFKSKL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3096 433 PANTHER ACYL-COA THIOESTERASE 55 433 IPR003703 GO:0006637|GO:0047617
Lja1g3096 433 Pfam Cyclic nucleotide-binding domain 38 115 IPR000595 -
Lja1g3096 433 SMART cnmp_10 19 136 IPR000595 -
Lja1g3096 433 CDD Thioesterase_II_repeat1 317 419 - -
Lja1g3096 433 Gene3D Jelly Rolls 3 128 IPR014710 -
Lja1g3096 433 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 46 62 IPR018488 -
Lja1g3096 433 SUPERFAMILY cAMP-binding domain-like 9 116 IPR018490 -
Lja1g3096 433 ProSiteProfiles cAMP/cGMP binding motif profile. 19 89 IPR000595 -
Lja1g3096 433 Gene3D - 132 422 IPR042171 -
Lja1g3096 433 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 421 IPR029069 -
Lja1g3096 433 Pfam Thioesterase-like superfamily 164 419 - -
Lja1g3096 433 PANTHER ACYL-COA THIOESTERASE 55 433 - -
Lja1g3096 433 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 244 IPR029069 -
Lja1g3096 433 CDD CAP_ED 19 116 IPR000595 -
Lja1g3096 433 CDD Thioesterase_II_repeat2 150 242 - -
Lja1g3096 433 TIGRFAM tesB: acyl-CoA thioesterase II 142 420 IPR003703 GO:0006637|GO:0047617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3096 Lja-Chr1 37754532 37761610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3096 5 433 Acyl Lipid Metabolism Gene Families AT1G01710 68.531 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3096 K01068 - gmx:100813197 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3096 1 37754532 37761610 Lja1g3096 1 37754532 37761610 ECH
Lja1g3096 1 37754532 37761610 Lja3g1894 3 21712400 21717835 PCT