Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3091 ATGAAGAAATTATCAAACTTTGATGAAATTTCTGATGTGGGTTATGATCACCCTTCACCTTCTATGGATCACTCAGCTCCTAATACTCCTGCTTTCTCCCCAATGAGTCGTGATTCTCTTGCATACTGCCGAGCCTGGACAAGCTCAGAGGCATCAAATTCTAACTTCTCAGAGATTGTAGATGACAGCAGCTACTCCAGTGAACCTTCGCCGTGTCGCTGGACGGCGGTTAAAGCTTCGCCGATGAAGCTGCGGAAGCATTCACTGGATGATAAGCTTGATGACAGTGATCTCCTTGATTCAGATGAGTTTCAAATGATGAAGGAAAGATTTGCAAAGCTTCTGCTTGGGGAAGACATGTCTGGTGGTGGGAAAGGTGTTTGCACTGCAGTTACAATCTCCAATGCCATTACCAATCTCTATGCAACTGTATTTGGACAAAACTTAAAGTTGGAGCCACTGAAGCCTGAGAAGAAGGCCATGTGGAAAAGGGAAATGAAGGTTCTTCTGTCAGTGTGTGATTACATCCAAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGCACAATTGTGGAGATGATGAAAAGCAGGCCAAGGTCAGACCTATATATCAACCTCCCTGCACTGCAAAAGCTTGACACAATGCTCATAGAAATATTGGATACTTTTGAGGATACTGAATTTTGGTATGCAGAGAACATACCTGGGAACTCAACTCGGTCACCGCGCGCAGCCTCGTTTCGGAAGATTGTTCCGAGGAAAGATGAGAAGTGGTGGCTTCCAGTTCCTTGTGTTCTCCCTGGTGGCCTCTCTGATAAGTCAAGGAAGCACCTTATAGAGAAAAGGGATTGTGCTAATCAAATTCATAAAGCAGCGATGGCAATAAATAGCAATGTTCTTGCAGAAATTGATATCCCAGAAACATATATAGATGATCTTCCCAAGAGTGGAAGAGCAAGTCTAGGGGACTCAATTTACCACTACATGAACACTGCAGACAAGTTCTCCCCTGATCACCTTCTTGAGTTTCTAAAGATAAGTTCAGAACATGAAGCACTTGACCTAGTAGACAGGGTCGAATCGTCGATGTACACGTGGAGGCGTAAAGCTTGTCTGAGCCATTCAAAGTCATCATGGAAAAAAGTTAAGGATCTCATGGCTGATACCGACTGCAAGGACAAAAACTACATCTTAGCTGAGAGAGCTGAGACACTGTTGTTTTGCCTGAAGCAAAGATATCCTGAACTCTCACAAACTTCTCTGGACACGACCAAGATCCAATACAACAGGGATGTAGGGAAAGCAGTGCTAGAAAGTTATTCAAGAGTTTTAGAAGGCCTAGCATTCAACATTGTTGCTTGGGTTGAAGATGTTCTTGATGTAGATAAATCAATGAGGAATCGAGAAGTCTAA 1416 0.4329 MKKLSNFDEISDVGYDHPSPSMDHSAPNTPAFSPMSRDSLAYCRAWTSSEASNSNFSEIVDDSSYSSEPSPCRWTAVKASPMKLRKHSLDDKLDDSDLLDSDEFQMMKERFAKLLLGEDMSGGGKGVCTAVTISNAITNLYATVFGQNLKLEPLKPEKKAMWKREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDLYINLPALQKLDTMLIEILDTFEDTEFWYAENIPGNSTRSPRAASFRKIVPRKDEKWWLPVPCVLPGGLSDKSRKHLIEKRDCANQIHKAAMAINSNVLAEIDIPETYIDDLPKSGRASLGDSIYHYMNTADKFSPDHLLEFLKISSEHEALDLVDRVESSMYTWRRKACLSHSKSSWKKVKDLMADTDCKDKNYILAERAETLLFCLKQRYPELSQTSLDTTKIQYNRDVGKAVLESYSRVLEGLAFNIVAWVEDVLDVDKSMRNREV* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3091 471 ProSiteProfiles PRONE domain profile. 94 471 IPR005512 GO:0005085
Lja1g3091 471 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 315 - -
Lja1g3091 471 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 103 467 IPR005512 GO:0005085
Lja1g3091 471 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 315 IPR038937 GO:0005085
Lja1g3091 471 MobiDBLite consensus disorder prediction 1 32 - -
Lja1g3091 471 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 316 471 - -
Lja1g3091 471 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 316 471 IPR038937 GO:0005085
Lja1g3091 471 Gene3D PRONE domain, subdomain 1 338 471 - -
Lja1g3091 471 Gene3D PRONE domain, subdomain 1 97 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3091 Lja-Chr1 37616434 37619501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3091 - - gmx:100806086 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3091 1 37616434 37619501 Lja1g3091 1 37616434 37619501 ECH
Lja1g3091 1 37616434 37619501 Lja3g2049 3 23822735 23825414 PCT