Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3065 ATGCCTACAATGTCCCACAATTGCAACCCCAAAGATTCAGAACAATTTTACCTTTCTTGGAACATAACAAAGCTTGTAACTTTCTGCTTCCTCTTAGCCTCCATATCCTACCTCTTATGTTCCTTAGGAGTGGTCACAAATTCACATGATTGTGACAACAAAAAAGCTTACCTTGTTCCCATCACCACACACATTGTTAATAATGCTCCTCCTCCCACAATTGAAGAAACCACCCCAGAAAAAGTAACACCCTCTGAAATTGAACCCACCAGTATTTCCCACATAGTGTTTGGCATAGGAGCCTCATCCAAATTATGGAATCACAGAAAAGAGTACATTAAATTATGGTGGAGACCCAATGTAACAAGGGGCAACGTGTGGCTAGACCAAGAAGTGCAACAACCTGAGGCAGGGGATGAGTTTCTTCTTCCAAGATTGAAACTTTCTGGTGACACTTCAAAGTTCAAGTACAAGCACCCAATTGGGAACAGGAATGGGATTAGGATTTCCAGGATTGTTTCAGAGACAGTGAGGCTTGTGAAGAAGGAAAAGAATTTGAACAATGTGAGGTGGTTTGTGATGGGGGATGATGATACTGTGTTTGTGACTGAGAATTTGGTGAGGGTGTTGCAGAAATATGATCATAATCAATTTTATTATATTGGGGCATTTTCAGAAAGTCATGTTCAGAACATAAAATTTTCTTACAACATGGCTTATGGTGGTGGTGGGTTTGCAATTAGCTATGGATTGGCTATGGCTTTGGAGAAGATGCAGGATAGGTGCATACAGAGGTACCCTGCATTGTATGGATCTGATGATAGGATTCAAGCTTGCATGGCTGAGCTTGGTGTTCCACTCACTGTTGAGAAAGGGTTTCACCAGTTTGATGTGTACGGCAACGTGTTTGGGCTCCTAGCAGCCCACCCCATCACACCACTAGTCTCCCTCCACCACCTGGACCTAGTCGAGCCCATATTCCCGAACATGACCCAAATCCAAGCCCTAAAACACCTCCTCCAAGGTCCAATAAAACTTGACCCACACGGCATCATGCAACAATCCATTTGCTACGACAAGAACCGGGACTGGACCGTGTCTGTTTCATGGGGTTACGCAATTCAAATATTTCGGCGGGTTTTCTCTGCCCGGGAAATGGAGATGCCGGCAAGAACGTTCTTGAACTGGTATCGGAGGGTGGATTACACTGGGTTCCCGTTCAACACAAGACCTTTCAGCCGCAATTCCTGTCAGAAACCGTTTGTTTTTTACTTGGCGGATGTGACGTTTGATGGTGAGAGGAATGAGAGTGTAACGAGGTATGCGAGGGTGCACCCGAATCCGAAGTGTAAGTGGAAGATGGCAAATCCAGAGACAATCCGAATGGTGACAGTTGTTAAGAAACTCGACCCGCACTTGTGGGATAAGTCTCCAAGAAGAAATTGTTGCAGGGTTCAACCCACAAAGGAGGAGGGAACTCTAGTGATTGATGTAGGGGAATGTAGAGAAGATGAAGTTGTTGCATTGTGA 1530 0.4471 MPTMSHNCNPKDSEQFYLSWNITKLVTFCFLLASISYLLCSLGVVTNSHDCDNKKAYLVPITTHIVNNAPPPTIEETTPEKVTPSEIEPTSISHIVFGIGASSKLWNHRKEYIKLWWRPNVTRGNVWLDQEVQQPEAGDEFLLPRLKLSGDTSKFKYKHPIGNRNGIRISRIVSETVRLVKKEKNLNNVRWFVMGDDDTVFVTENLVRVLQKYDHNQFYYIGAFSESHVQNIKFSYNMAYGGGGFAISYGLAMALEKMQDRCIQRYPALYGSDDRIQACMAELGVPLTVEKGFHQFDVYGNVFGLLAAHPITPLVSLHHLDLVEPIFPNMTQIQALKHLLQGPIKLDPHGIMQQSICYDKNRDWTVSVSWGYAIQIFRRVFSAREMEMPARTFLNWYRRVDYTGFPFNTRPFSRNSCQKPFVFYLADVTFDGERNESVTRYARVHPNPKCKWKMANPETIRMVTVVKKLDPHLWDKSPRRNCCRVQPTKEEGTLVIDVGECREDEVVAL* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3065 509 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 6 508 - -
Lja1g3065 509 Pfam Protein of unknown function, DUF604 230 483 IPR006740 -
Lja1g3065 509 Gene3D - 83 338 - -
Lja1g3065 509 PANTHER FRINGE-RELATED 6 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3065 Lja-Chr1 37183614 37188955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3065 22 503 Glycosyltransferase AT5G41460 60.161 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3065 - - gmx:100777888 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3065 1 37183614 37188955 Lja3g1860 3 21206461 21211217 PCT