Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2302 ATGGAGGGAGGAAGCGCCTCATCACCCGTGACCCAGTACTGGCAGCAATATTCGATGCTCTTCCAGCACTATCTTGACAAATCCACTCCCCACGCTGCTTACAGATGGATTGGGACTGCGATCCTCGCGTCAATCTACATTCTGCGTGTGTTTTATCTGCAGGGGTTTTACATTGTCTCTTACGGCCTCGGAATCTACCTCCTCAATCTCTTGATCGGGTTTCTTTCACCTCTCGTTGATCCTCAGCTCGAACCTTCTGATTCCGCTGTGCTCCCTACCAAGGGCTCTGATGAGTTCAAACCCTTCATTCGCAGGCTTCCTGAGTTTAAGTTCTGGTATTCTTTCACCAAGGCTTGCTGCGTAGGGTTTGTGATGACCTTCTTTTCCGTATTTGATGTTCCTGTCTTCTGGCCTATATTACTCTGTTACTGGGCTGTTCTCTTTGTCCTTACCATGAGGCGCCAGATTGCACACATGATCAAATACAAGTATATCCCATTCAACATCGGAAAGCAGAAGTATGGCAGTAACAAATCTTCTGCAAGTCGTAGGGGCTCTAGAGCAGAGTAA 570 0.4772 MEGGSASSPVTQYWQQYSMLFQHYLDKSTPHAAYRWIGTAILASIYILRVFYLQGFYIVSYGLGIYLLNLLIGFLSPLVDPQLEPSDSAVLPTKGSDEFKPFIRRLPEFKFWYSFTKACCVGFVMTFFSVFDVPVFWPILLCYWAVLFVLTMRRQIAHMIKYKYIPFNIGKQKYGSNKSSASRRGSRAE* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2302 189 Pfam Rer1 family 14 175 IPR004932 GO:0016021
Lja1g2302 189 PIRSF AtER_Rer1p 1 185 IPR004932 GO:0016021
Lja1g2302 189 PANTHER PROTEIN RER1 3 183 IPR004932 GO:0016021
Lja1g2302 189 PANTHER PROTEIN RER1A 3 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2302 Lja-Chr1 26725334 26727874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2302 2 183 Miscellaneous Gene Families AT4G39220 74.317 1.73e-99 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2302 - - gmx:100499996 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2302 1 26725334 26727874 Lja1g2302 1 26725334 26727874 ECH
Lja1g2302 1 26725334 26727874 Lja2g0308 2 2793607 2795902 ECH