Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1154 ATGGCGCCTAGTCGCAGAAAGGGTGGGAAGAAAGCGGCGGCGGCAGCGGCTTGCCGGGAATGGAAGGTTGGTGATCTTGTGCTTGCGAAAGTCAAAGGGTTCCCTGCTTGGCCTGCCACGGTAAGTGAGCTGGCGAAGTGGGGTTACTCGACTGATCGGAAGAAAGTGCTTGTTTACTTCTTTGGAACCCAACAGATAGCTTTCTGCAACCCTGCCGATATTGTTGCATTTACTGAAGAGAAGAAACAGTCTCTTGTCAAATGTCGAGGAAGGGGTGCTGATTTTGTCCGTGCAGTGAAGGAGATCATTGAAAGTTATGAAAAACTAAAGAGAAAGACCCAAGTTGATAATATTAGCTCTGGCGGTGAAGTTACTAACTTAAATGTGTCAAATCCACTTGATCCATCTACCAGCATAGGGTTAAAGGATGAGTTGGATGCTGCTTTGATAATCAATTCACAAATGAAATATTCAAATTCTGCAACTGACAGACCTGAACTAGTTTGTGCAGCTGAGCATGACTCAGCTGTTGCAATGAGAGATGAATCTAATGATAAGGAGGATGTAGAGGAGCCTACCGATAACTCTGTTGCAACTGCGACTGTAAAATCACCGCTGCCAGTAACACTGAGAAATACACCAGCTCAAAGGTCTAGAAGCCCATCACAGGTCCAAAACTTTGTTGTACCTTGTAGCGATGGTGGAAGTAATGGTGGCAACACATCATCTTATGCAATCCAGAAGGCATCTATAAGAAGGAACAAACATATTAGGAAATCACCTGACCTTTTTGGCTGTAGCGGTAACAATTCTGATGTTAGCATGGAGGAAAATGGTTCTGAAATTATTACAACCAATTCTGATGCCTATAGCTTACACGAGGGAAGTGTAATAGATTCTAATTTAGAACTTGAGGTGGCTGAGACTGTTGAGTGCCCTGATTGTGAAGTCGAGTTAAACAAAGGCCACCATGAAACAAAGTCTGCCATCAATAAGAAGAAAAGAAAACCAAACAAGAGGGAAACTAATGATGCTGGTGCTCAGAATGCCTGTCAAAATTTGCAGAATATGTGTGGAAATTCAAAAGAGAGATGCTCTGACCAAGATGGAGATAAACACTTGCCCCTTTCGAAGCGAGCCAGAGTTAGAATGGGTAAATCATCACCCACAGAGACAGAACAGAATCACATTGTGCAAGTTCAAGGGAAAAGCTGTAAGGAAGATATTAACTCAACACAGCAGATAATCACATCCTCAAATTGTGAAAAAGATAGCCTTCCTATTGAAGATCCAGCAGCATTTAATGGAGCTTTGGTTGATGTCCCTTCTACGTCATTAGCTCCATGTTCTGAATATAGATCTCAAATTTGTGAAGTTAAGAGAGAGCAAATGTTTGGCTGCTCTATGGACGATGAGGCTGCTTTACCCCCATCTAAACGCCTCCACCGTGCTTTAGAAGCTATGTCTGCCAATGCCACTGAAGAAGGTTATGTTTGCATGGAGCCATCATCCTCTATAATGACATCAAGTGGTGGATTCTGCATATCTGCCACAAAAAGATGTCCTTGTACGACCATTAATAATAAAGGAAGTAGTGATCTAGAACTGCAAGGGCTGAATTCTTGGGGCGTTGATTGTTCCAATATCAGTGTGTGTTGTTTCTCAGCTCATTCAAATCCAATGATTTTAACAGAGAAAAAGTTATCTGCGGAAGTGGATAAGCTGTTAACCAAGATACAACAACATGAAACTGGCAAGGATGTCATCCCTGGTGCTAGAGACCAAGTTGGTGAAGAACTTAGTGACTCTATGGTTTTCCAGCCTGCTAAAATAGATTCACAAGTTCCAATACAAGGAAAAGTTTCTCCTAATTTTGATGTGAAATTTTGTAAAGTTGGAAGCAATCAAGATTCACCAGGTCCTTCACTGCCACCAAATAATGATGATAATATCAGGCCTGGGAACCATTCAGATGCATCTGATACATTAGATCATGGTGGAATAAGTCTTGATCCTGTTGCAGGTGCCAATGAAAGTTGTAAGTTATTACCTCAAAATAGTATTAACGCGCATCACAATGTGATAGCTGTTTGTGAGGATGAGAAGCGAGCAGCTGGTGCCTGGAGTAAAATTAATGACATGCAAGATGCTGTGAAAGTGGTCAATTTTAATGAACAAGAGAAGGATAGGAATTCTGTTTCAATATCCAATGATTGTTCAGATGGAAAGGGTAATTTGGGCAGTCTGTCAAGCCCATCCTTGACTAGTGGGGGAGATTGCCATCTACAAGGTTCACCTCCTAATACATCAGTTTGCTATATTTCTACATCAGACAGTAGTAATATCCTTCAAAATGGAAGTTGTAGCCCTGATGTACACCAGAACAACATTTTCTGTTGTCCTATTGATGACTGGAAAGATGGGACTGTGGCAAATCAACAATCAAGATCTGTAGGCAAGTCAACTGAAGCAGGACATGCTGCTTTGCTGTACTTTGGAGCAATGCTTGGGACATTGACAAGGACAAAAGAAAGTATTGGTCGAGCAACACGCATAGCTATTGATTGTGCGAAGTTTGGTATAGCAACTAAGGTGGTGGAAATTCTCGTCCACAATTTGGAAACTGAGTCAAGCCTGCATCGAAGGGTGGATCTGTTTTTTCTTGTTGACTCTATTGTTCAATGCTCTCGAAAACTGAAAGGAGATGTTGGTGGAGTATATCCATCTGCTCTTCAAGCAGTCCTGCCACGGCTATTGTCTGCTGCTGCTCCTCCTGGAAATATTGCACAAGAAAATCGGAGGCAGTGTCTTAAGGTTTTAAAGCTGTGGTTGAAGAGAAGAATCCTACCAGAACCCACTATTCGCCGTCATATCCAGAAACTGGACTCATATAACAGTTTGGCTTTCGCAGGTGCCTTTTCACGACGTTCATTAAGAACAGAGAGAGCTTTTGATGACCCTGTTAGGGAAATGGAGGGTATGCTTGTTGATGAATATGGAAGTAATTCAAGCTTTCAACTACCTGGATTTTATATGCCCCGAATGCTTGAAGAAGAAGGTAGTGATTCTGATGGAGGGAACTTCGAGGCCGTCACGCCTGAGCATGATTCTGAAACACATGAAGTGCAAGAAAAGGTTCATGCAATTGAAAAGCACAAGCATGTGTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTAGCTCCCTCTTCTGATGTTGAATTTACTACAATTTGTAATGTTGATCAAGGAAATTCCATGCAGTTAGAGAAGAATCTTCCTCTTTCCTGTGTTCCTTCTTTACTACAGGATGTGTCGTCATTTCCCCCTCCTCCATCTTCATCCCTTCCACCACCACCACCACCCCCACCGCCACCAACAGTGCACCCAATGTTAGCTACTTCTAATCAATATCACACTACAGTTGATTCAAAAGTTTTTGCAGATTCACAGACCGTGAAAGATAACACACTCCATTCTACTCAGCCCCTGGCTGCACCAAGAAATATAGAGATATGTAGAGACATGCTGATGCAGATACCCAAGTCTACTTGCTCTTTCAACACTTACCCTGTACAACCACCAGACAATTCCAGGAGTTCTGATGGCGTTATGCATAATAAAGGTTACTCCTTACAGCCACCTCACCATGTGCCATCCAATCAGTTTTCTTTTGTTCATGTGGAACATCATGTTAAGTCTCAGAGGGAGGTTCCTCCACCCCCTTCATACTCCAATGCAGGCCACTTTACGAAGAACATGAAGAGAGAGAATAACTGCAACAATCACGAGAGACTAAAACCACCTCCCTGTGATTACCAAGAGAGTTGGAATTTTCCTGCACCTTATTCTGGTGCGCTGGCCCCTTATGGTTGTCATCCAAGTGAATCAACTAGATTATCAGGTCATGGGTGGAGATTTCCGCCCCCGTCAGTGAATTATAGGGACTCCATGCCTTTCAGACCCCGCTTTGAAGATGCAATTCCAGTGACAAACCGAGTTGTTTCAGGCCCAAGCTTTTGGCAGCCAAGGTGA 4038 0.4279 MAPSRRKGGKKAAAAAACREWKVGDLVLAKVKGFPAWPATVSELAKWGYSTDRKKVLVYFFGTQQIAFCNPADIVAFTEEKKQSLVKCRGRGADFVRAVKEIIESYEKLKRKTQVDNISSGGEVTNLNVSNPLDPSTSIGLKDELDAALIINSQMKYSNSATDRPELVCAAEHDSAVAMRDESNDKEDVEEPTDNSVATATVKSPLPVTLRNTPAQRSRSPSQVQNFVVPCSDGGSNGGNTSSYAIQKASIRRNKHIRKSPDLFGCSGNNSDVSMEENGSEIITTNSDAYSLHEGSVIDSNLELEVAETVECPDCEVELNKGHHETKSAINKKKRKPNKRETNDAGAQNACQNLQNMCGNSKERCSDQDGDKHLPLSKRARVRMGKSSPTETEQNHIVQVQGKSCKEDINSTQQIITSSNCEKDSLPIEDPAAFNGALVDVPSTSLAPCSEYRSQICEVKREQMFGCSMDDEAALPPSKRLHRALEAMSANATEEGYVCMEPSSSIMTSSGGFCISATKRCPCTTINNKGSSDLELQGLNSWGVDCSNISVCCFSAHSNPMILTEKKLSAEVDKLLTKIQQHETGKDVIPGARDQVGEELSDSMVFQPAKIDSQVPIQGKVSPNFDVKFCKVGSNQDSPGPSLPPNNDDNIRPGNHSDASDTLDHGGISLDPVAGANESCKLLPQNSINAHHNVIAVCEDEKRAAGAWSKINDMQDAVKVVNFNEQEKDRNSVSISNDCSDGKGNLGSLSSPSLTSGGDCHLQGSPPNTSVCYISTSDSSNILQNGSCSPDVHQNNIFCCPIDDWKDGTVANQQSRSVGKSTEAGHAALLYFGAMLGTLTRTKESIGRATRIAIDCAKFGIATKVVEILVHNLETESSLHRRVDLFFLVDSIVQCSRKLKGDVGGVYPSALQAVLPRLLSAAAPPGNIAQENRRQCLKVLKLWLKRRILPEPTIRRHIQKLDSYNSLAFAGAFSRRSLRTERAFDDPVREMEGMLVDEYGSNSSFQLPGFYMPRMLEEEGSDSDGGNFEAVTPEHDSETHEVQEKVHAIEKHKHVLEDVDGELEMEDVAPSSDVEFTTICNVDQGNSMQLEKNLPLSCVPSLLQDVSSFPPPPSSSLPPPPPPPPPPTVHPMLATSNQYHTTVDSKVFADSQTVKDNTLHSTQPLAAPRNIEICRDMLMQIPKSTCSFNTYPVQPPDNSRSSDGVMHNKGYSLQPPHHVPSNQFSFVHVEHHVKSQREVPPPPSYSNAGHFTKNMKRENNCNNHERLKPPPCDYQESWNFPAPYSGALAPYGCHPSESTRLSGHGWRFPPPSVNYRDSMPFRPRFEDAIPVTNRVVSGPSFWQPR* 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1154 1345 PANTHER PWWP DOMAIN PROTEIN 1 1345 - -
Lja1g1154 1345 Gene3D - 3 107 - -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 176 224 - -
Lja1g1154 1345 CDD HDGF_related 19 105 IPR035496 -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 633 667 - -
Lja1g1154 1345 Pfam CID domain 833 955 IPR006569 -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 326 347 - -
Lja1g1154 1345 ProSiteProfiles PWWP domain profile. 23 80 IPR000313 -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 1105 1133 - -
Lja1g1154 1345 Pfam PWWP domain 24 106 IPR000313 -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 176 193 - -
Lja1g1154 1345 Gene3D - 831 967 IPR008942 -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 364 378 - -
Lja1g1154 1345 SMART PWWP_4 21 78 IPR000313 -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 194 224 - -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 1111 1131 - -
Lja1g1154 1345 SMART 558neu5 831 962 IPR006569 -
Lja1g1154 1345 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1345 - -
Lja1g1154 1345 SUPERFAMILY Tudor/PWWP/MBT 18 116 - -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 362 394 - -
Lja1g1154 1345 MobiDBLite consensus disorder prediction 633 653 - -
Lja1g1154 1345 ProSiteProfiles CID domain profile. 824 965 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1154 Lja-Chr1 11843587 11853613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1154 - - lja:Lj0g3v0304019.1 2061.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1154 1 11843587 11853613 Lja1g1154 1 11843587 11853613 ECH
Lja1g1154 1 11843587 11853613 Lja5g2012 5 26189521 26206067 PCT