Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1108 ATGCTGCTGAGGAACAGATCAAGGGCAGTGACCAAGCCACCTTTGATGGCTGATCACAGTTCCAACCCTTCTCCCAATCAAAATTGTGCTAAAACCATTCCATCTCTATTTGGCTCACCAAAGTTTAGAGACTTCACCAACAAGTGTCTCTCTGCAGGAACTGATGCTTTGAGAAGCCCAACTTCAATTCTTGACACCAGATCCTTTATACCCTCTTTTGGTTTTGGAAATCCATTCTCACATGACAAAAGTACCCAAACTTTTCCCCTCAAAACCTCAGAAACCAGAAGCTCCATGGTCTCAAAAGGCATTGGCCTTGCTCTTGTGGGTGATTTCAAAGATGAGCTAGTTGATGAGAAAAATTCTGCTGAACCCATCAAAGGAAGTGTCTTTCTTGGAAAGCAGCTCAGAGTGAAAATCCCACCCCTGGAATATCCTTCATCATTCTCTCCATCCAAATCTCAAACTCATGGTGGTCATGATTTTGGAACCAAAACCAAGGCCTCACAACAAAACACTGCAACTCAGGATTCTCCAAGTGTAGTTGTTACCAGTGTTCTGTCTCTGAGTGAGATGGAGCTTTCTGAGGAATACACATGTGTGATATCCCATGGACCTACCCCAAGAACCACCCACATATTCAACAATTCCATTGTGGAGAGTTACTATTCTCTGCCCCCAGACTCTCCCTCTTCTTCTTCTTCTGTGAACTTCCTCAGCTTCTGTTACACTTGCAAGAAACATCTTGAGCAGACAAAAGACATCTTTATTTATGGAGGAGAGAAAGCTTTCTGCAGTAGAGAATGCCGCCACAGAGAAATGGTGTTAGATGGTGTAGAATGTTTAGATTTTGAAATTAATGACTATTTTTGA 873 0.4261 MLLRNRSRAVTKPPLMADHSSNPSPNQNCAKTIPSLFGSPKFRDFTNKCLSAGTDALRSPTSILDTRSFIPSFGFGNPFSHDKSTQTFPLKTSETRSSMVSKGIGLALVGDFKDELVDEKNSAEPIKGSVFLGKQLRVKIPPLEYPSSFSPSKSQTHGGHDFGTKTKASQQNTATQDSPSVVVTSVLSLSEMELSEEYTCVISHGPTPRTTHIFNNSIVESYYSLPPDSPSSSSSVNFLSFCYTCKKHLEQTKDIFIYGGEKAFCSRECRHREMVLDGVECLDFEINDYF* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1108 290 MobiDBLite consensus disorder prediction 1 27 - -
Lja1g1108 290 PANTHER FCS-LIKE ZINC FINGER 8 2 280 IPR044593 -
Lja1g1108 290 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 280 - -
Lja1g1108 290 MobiDBLite consensus disorder prediction 147 179 - -
Lja1g1108 290 Pfam zinc-finger of the FCS-type, C2-C2 232 277 IPR007650 -
Lja1g1108 290 ProSiteProfiles Zinc finger FLZ-type profile. 237 281 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1108 Lja-Chr1 11045985 11048523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1108 - - lja:Lj1g3v4446640.1 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1108 1 11045985 11048523 Lja1g1108 1 11045985 11048523 ECH
Lja1g1108 1 11045985 11048523 Lja5g1962 5 25061811 25063791 PCT