Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1070 ATGGACCCCTTAATGCGATCGGAGCTAATCCGCTACGGCGAGATGGCCCAGGCCTGCTACGACGGATTTGACTTCGACCCGTACTCCAAGTACTGCGGCAGTTGCAGGTTCTCGCTCCCGCAGTTCCTAGAGTCTCTCGGCCTGTCCCACCTTGGGTACACCGTCACACGCTACCTCTACGCGACCGCCAACGTCAGCGTGCCCAGACTGTTCAAGTTGTCGCGCTGGCCCGACAAGATGTGGAGCAAGCGCGCCAACTGGGCAGGCTTCGTGGCGGTCTCAGATGATGCCACCACCCAGCGCCTCGGGCGCAGGGACATCGTGGTAGCCTGGCGCGGGACCGTCACCCACGTGGAGTGGGTGGCGGACCTCAAGAACTATCTCACGCCTGTGTCCCCCGACATCCCCTGCCCGGACAAGGGAGTCAAGGTGGAAGCGGGTTTCCTCGACGTGTACACTGACAAGGACGAGACCGAAGGCGGCTATTGCAAGTACTCGGCGAGGGAGCAGGTGTTGGCGGAGGTGAAGCGGCTGGTGGACAAGTACTCTCACGAGGACATTAGCGTGACTATAACAGGGCACAGCCTCGGCAGCGCGATGGCGACGCTAAGCGCTTACGACGTGGCGGAGATGGAGTTGAGGGACATGGGAGGGAAGAGTAAGGTGCATGTTTCAGTGTTTTCATTTTCAGGGCCAAGGGTAGGGAACTTGAGGTTCAAGGAGAGGTTGGAGAAGCAGTTAGGGGTCAAGGTGTTGAGGGTGCACAACGCGCATGACATGGTGGCGAAGTCGCCGGGGGTTTTGGTGAATGAGACGTCGCCGGCGTGGCTGCTGAAGGTGGCGGAGGGGTTTCCATGGTGCTACACACATGTTGGGGTGGATCTGGAGTTGGACCATAAGAGATCGCCGTACCTGAACCCTGATGGGGATGGAGCTTGTGCCCATAACTTGGAGGCCCACTTGCACTTACTCGACGGATACCATGGTAAGAATCGTGAATTTAAACCAATGATTGGAAGAGACCTTGCTCTGGTGAACAAGGACTGTGATTTTCTGAAAGATGAGCACTCAGTACCACCAAAGTGGAGGCAAGATCATAACAAGAACATGGTCAGAACCGAAGATGGACGGTGGGTGCTGGCGGAGCGCCCCAAACCTGACGATCATCCTGAATACACTCAACAACATCTCACCGAGCTAGGCCTCGCTAATTCATCTAAAAGCTAA 1227 0.5689 MDPLMRSELIRYGEMAQACYDGFDFDPYSKYCGSCRFSLPQFLESLGLSHLGYTVTRYLYATANVSVPRLFKLSRWPDKMWSKRANWAGFVAVSDDATTQRLGRRDIVVAWRGTVTHVEWVADLKNYLTPVSPDIPCPDKGVKVEAGFLDVYTDKDETEGGYCKYSAREQVLAEVKRLVDKYSHEDISVTITGHSLGSAMATLSAYDVAEMELRDMGGKSKVHVSVFSFSGPRVGNLRFKERLEKQLGVKVLRVHNAHDMVAKSPGVLVNETSPAWLLKVAEGFPWCYTHVGVDLELDHKRSPYLNPDGDGACAHNLEAHLHLLDGYHGKNREFKPMIGRDLALVNKDCDFLKDEHSVPPKWRQDHNKNMVRTEDGRWVLAERPKPDDHPEYTQQHLTELGLANSSKS* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1070 408 Gene3D alpha/beta hydrolase 1 392 IPR029058 -
Lja1g1070 408 MobiDBLite consensus disorder prediction 382 408 - -
Lja1g1070 408 CDD Lipase_3 41 309 - -
Lja1g1070 408 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 1 401 - -
Lja1g1070 408 PANTHER PHOSPHOLIPASE A1 1 401 - -
Lja1g1070 408 SUPERFAMILY alpha/beta-Hydrolases 76 326 IPR029058 -
Lja1g1070 408 Pfam Lipase (class 3) 108 267 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1070 Lja-Chr1 10661705 10665101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1070 1 402 Acyl Lipid Metabolism Gene Families AT2G30550 59.658 1.64e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1070 - - gmx:100815007 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1070 1 10661705 10665101 Lja5g1909 5 23464508 23467128 PCT