Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1037 ATGGAGAAGGAAGAAGGTCCCGTGTTCTGGTTCGAGACCTCTGGCTCTGTTTGTCACCGACACCACTTTCAATCCAATGGTCAACTTTCCGTAATGCTCGTTGATGATTCCAGGCCATTATACCAAAAGGTGGCTGGGTCTTTCATGAATAAATTTTTTCCATCAGGATATCCATACAGTGTAAATGAAGGCTATCTCAGATACACTCAGTTTCGATCTGTTCAACATGTTACCAGTGCAGCACTATCAGTTCTATCAACTCAGTCATTGCTATTTGCTGCAGGGTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGCTGGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCAAGAATGGATTCTGAACCTAAACGTTGGAGACTAATAGCTGATGTGCTCTATGATTTAGGCACGGGCTTGGAAGTGCTTTCTCCATTATGTCCACATCTTTTTCTTCAAATGGCAGGCCTAGGAAATTTTGCAAAGGGGATGGCAGTTGTTGCAGCAAGGGCAACAAGATTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGTGACCTGTTTGCGAAGGGGGAGGCTTTTTCAACACTCTGTAACGTTATTGGGATTGGAGTTGGAATTCAGCTAGCATCTACTATCTGTGCATCAGTGCAGGGAAAGATGGTTGTAGGTCCTCTCCTTTCAATTTTACATATATACAGTGTGTCTGAAGAAATGAGAGCAACACCTATCAATACCTTGAATCCACGAAGAACTGCAATGATCGTGACAGATTTTCTCAAGGCAGGAGTTGTCTCAAGCCCTGCTGATCTAAGATATAGAGAGGATCTGCTGTTTCGTGTCCGACTCACAGAAGATGCTGGAAATGTAAGAGTGGGGAGGGCTTTGCATGAGGTTATTAAGCCTTCCAGGCTTCTTGAATTAGAACAGGTACTTCCAGGGGAGAAGTTTCTCTTAAATCGTGGGGGTAAATGCGTCGACATGGTGTTGGAACAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAAATTGAGAATTCCTCTCATGAGCTCAGTGCTAGTGTCCTGCATGAGGCTTACAAGAAAATGACCGGTGTGTTTCCTGTATTTTTAAAAGAATTACAGAGCAAAGGGTGGCACACTGATCGTTTTCTGGATGGAACTGGGAGCCGCTTTGCATTCTAG 1245 0.441 MEKEEGPVFWFETSGSVCHRHHFQSNGQLSVMLVDDSRPLYQKVAGSFMNKFFPSGYPYSVNEGYLRYTQFRSVQHVTSAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLIADVLYDLGTGLEVLSPLCPHLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLCNVIGIGVGIQLASTICASVQGKMVVGPLLSILHIYSVSEEMRATPINTLNPRRTAMIVTDFLKAGVVSSPADLRYREDLLFRVRLTEDAGNVRVGRALHEVIKPSRLLELEQVLPGEKFLLNRGGKCVDMVLEQDASGEDALRGWLVAAYAAQIENSSHELSASVLHEAYKKMTGVFPVFLKELQSKGWHTDRFLDGTGSRFAF* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1037 414 Pfam Vitamin B6 photo-protection and homoeostasis 43 274 IPR006968 -
Lja1g1037 414 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 3 414 - -
Lja1g1037 414 PANTHER RUS1 FAMILY PROTEIN C16ORF58 3 414 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1037 Lja-Chr1 10317110 10321068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1037 - - gmx:100820508 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1037 1 10317110 10321068 Lja1g1037 1 10317110 10321068 ECH
Lja1g1037 1 10317110 10321068 Lja5g1858 5 22062808 22069852 PCT