Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0991 ATGGGAATACTCAGAACAAAACGCTTCACTCTCCAATTTCTGAAGCCCTTTCTCTTCATGCTCATCGTTCTTGGTCCTACCACCGCACCAACCTCAGCTGCTGATTACACCACCCTGGTCTACAAGGGTTGTTCACAGCAGAAGCTTCAAGATGGGAACTCCGACAATCTCAAAACGCTGCTATCTTCTCTGGTCGCCGAGTCAGGGCAAAAGGGTTTCGCCGCCATAACCGCCGGGAACGCTGTCTCCGGCGCGTACCAATGCAGGGGTGACCTGTCAAACTCCGACTGCCACTCCTGCGTCAGCGAGATTTCCAACTCGCTCGGCCGACTCTGCGGTGGCGGTGACGTGGCGGCGGCGCGGGTTCAGCTCAGCGGGTGTTATCTCAGGTACGAGGATGTCGGGTTCAAGCAGGTGTCGCAGGATCAGCTGCTGTACAAGGTGTGTGGCTCCAGGAAGGTGGTTGACGGCGGCGGGTTTGAGGCTAGGAGGGATGCGGCGTTTGTGATGGTGGAGAATGGGTTGAAGATCGGTGGGGGTTTGTTCTACACGGGGAGTTATCAGTCTCTGTATGTGCTAGGGCAATGTGAGGGGAATTTGGGAAGTGATGATTGTGTTGCTTGTGTGAAGAGTGCTGAGGATGTTGCTAAAGCTCAGTGTGGTGATTCGATTTCTGCACAGGTTTATCTGTATAGCTGCTATATCAGTTATAGCTTTTACCCTAATGGAGTTCCCACCATCGCATCTTCTTCTCCAGGCGGGCATCAACACACTTCCAGGACAGTGGCTATTGCAGTGGGAGGTGTTGCAGCTTTTGGATTCTTGATTGTTTGCTTGATGTGTCTCAAGTCAGTGTTGAAGAAAAGAAGTGGTAGCAAGTATTGA 885 0.5232 MGILRTKRFTLQFLKPFLFMLIVLGPTTAPTSAADYTTLVYKGCSQQKLQDGNSDNLKTLLSSLVAESGQKGFAAITAGNAVSGAYQCRGDLSNSDCHSCVSEISNSLGRLCGGGDVAAARVQLSGCYLRYEDVGFKQVSQDQLLYKVCGSRKVVDGGGFEARRDAAFVMVENGLKIGGGLFYTGSYQSLYVLGQCEGNLGSDDCVACVKSAEDVAKAQCGDSISAQVYLYSCYISYSFYPNGVPTIASSSPGGHQHTSRTVAIAVGGVAAFGFLIVCLMCLKSVLKKRSGSKY* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0991 294 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 290 - -
Lja1g0991 294 Pfam Salt stress response/antifungal 53 133 IPR002902 -
Lja1g0991 294 Pfam Salt stress response/antifungal 187 239 IPR002902 -
Lja1g0991 294 ProSiteProfiles Gnk2-homologous domain profile. 142 242 IPR002902 -
Lja1g0991 294 ProSiteProfiles Gnk2-homologous domain profile. 35 136 IPR002902 -
Lja1g0991 294 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 11 290 - -
Lja1g0991 294 Gene3D - 36 136 IPR038408 -
Lja1g0991 294 Gene3D - 141 241 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0991 Lja-Chr1 9829481 9831613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0991 49 238 Receptor kinase-like Gene Family AT5G40380 28.646 6.78e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0991 - - gmx:100786830 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0991 1 9829481 9831613 Lja1g0991 1 9829481 9831613 ECH
Lja1g0991 1 9829481 9831613 Lja5g2112 5 28771488 28774169 PCT