Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0923 ATGAGAACAGAGTCAAGGAAATCCAAGTCTTCTTGGTTAGCTGTGAGGAAGTGGCTGAATGTAAAGAGCAATTCCGATGCCAAGAAAAATAGTTGCTCCGACCAAGATAGTAACGCTTTCGTACCTGATCATTTCTCAGATTGGTTGAAGGATTCTACAAATGGAATGAAAGGTTCAGCAGTAGGAGAGAAGGAAACAAGTCATGTCACTACTAATGCTATGAACCTTAGGATGTTTGCTGGGACGTGGAATGTTGGAGGGAAGTCACCGAATGAAGGATTGAACTTGAAAAGTTGGCTGACGTCTCATTCTCCAGCTGACATTTATGTTATTGGGTTCCAAGAAATTGTGCCCCTAAACGCAGGGAACGTGCTTGGACCGGAGGACAGTGGCCCAGCATCAAAGTGGCTGGCCCTCATTCGTGAAGCCTTGAACACCAATGATATTATTGATACAGAAACAACCTCTCCTCTTACCTCGTATCTCACGAGTGATTCTGATTCCAGACACTATTGCCAAGTAACAAGCAAGCAAATGGTTGGTGTCTTCTTGTCCGTGTGGGTCCGAGCTGATCTTTGCAACCATCTCACCAATTTAAAACTCTCCTGTGTTGGCAGAGGCATCATGGGCTATCTTGGAAACAAGGGTTCAATATCAATTAGCATGACATTGTACAACACCACATTCTGCTTTGTATGCACCCACTTAGCCTCTGGAGAGAAATTTGGTGACGAGTTGCGAAGAAACTTGGATGTGTCTGAAATCTTGAAGAAAACTAAATTTTGCCACTCCTTTAAGTCCCTTCTTCACCCACAAACCATACTAGAACATGACATTATTATTTGGCTTGGGGATTTGAATTATCGCCTTGCTGCTGGTTACGATGATACACACGAGCTTCTAAAGAAGAATGATTGGGAGGCATTACTAGAGAAGGATCAGCTAAGGATAGAGCAGAGAGCTGGTAGAGTATTCAAAGGGTGGAATGAAGGAAGCATATACTTTGCTCCTACATACAAGTACTTGACCAATTCTGACCAATATGTGGCCCAAACCTCCAAGTCCAAGGAAAAACCAAGAACCCCTGCTTGGTGTGATCGAATTCTGTGGAAAGGGGAAGGCCTCAATCAGATGTGGTATGTGCGAGGAGAGTCCAAATTCTCAGACCACAGGCCAGTGTCTTCACTATTCTCAGTTCAAGTGGACAAGTCAAGTAAGAATCTCACTCCTTCTGCTGCCACTGTCACCAGGTCCTGCTCCTTAAAACCATTGACAAGTGCTGCATTTTCATCCACATGCGCTGCTAAAGTCCAAGCAGAAGAGCAGCTTATGTTGCTAACAAGAGCTCAAAGTTGCATAGTCAGCGCGCCGAGGTAA 1377 0.4444 MRTESRKSKSSWLAVRKWLNVKSNSDAKKNSCSDQDSNAFVPDHFSDWLKDSTNGMKGSAVGEKETSHVTTNAMNLRMFAGTWNVGGKSPNEGLNLKSWLTSHSPADIYVIGFQEIVPLNAGNVLGPEDSGPASKWLALIREALNTNDIIDTETTSPLTSYLTSDSDSRHYCQVTSKQMVGVFLSVWVRADLCNHLTNLKLSCVGRGIMGYLGNKGSISISMTLYNTTFCFVCTHLASGEKFGDELRRNLDVSEILKKTKFCHSFKSLLHPQTILEHDIIIWLGDLNYRLAAGYDDTHELLKKNDWEALLEKDQLRIEQRAGRVFKGWNEGSIYFAPTYKYLTNSDQYVAQTSKSKEKPRTPAWCDRILWKGEGLNQMWYVRGESKFSDHRPVSSLFSVQVDKSSKNLTPSAATVTRSCSLKPLTSAAFSSTCAAKVQAEEQLMLLTRAQSCIVSAPR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0923 458 SUPERFAMILY DNase I-like 69 403 IPR036691 -
Lja1g0923 458 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 14 448 IPR045849 GO:0004445|GO:0046855
Lja1g0923 458 Pfam Endonuclease/Exonuclease/phosphatase family 81 390 IPR005135 GO:0003824
Lja1g0923 458 SMART i5p_5 74 405 IPR000300 GO:0016791|GO:0046856
Lja1g0923 458 Gene3D Endonuclease/exonuclease/phosphatase 59 422 IPR036691 -
Lja1g0923 458 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 14 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0923 Lja-Chr1 9099384 9104065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0923 54 408 Acyl Lipid Metabolism Gene Families AT2G43900 27.764 4.78e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0923 - - gmx:100777569 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0923 1 9099384 9104065 Lja5g2749 5 54488519 54499832 PCT