LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g0764	ATGGCGTCAAGTCAACAACCATTCAAGGGAGACAGAGCTGAGGCAGCCGCCAAGCTCGCCGCCAAAGACATCGGCGATATCAACCGAGCTAATGAGCGAGACGAAGGGTTTTCCCTCAACAAAGAAGCTAACTTCAAGCAGGCACGAGCTGAGGCAGCTGCGAAGCTCGCCGCTAAGGATCTTGAAGACGTGAACAGAGCCAGAGACGCCGCATTTGGCAGCGGTGGCGGTGCTTCCGTAGAGTACCAGAACCAGCAGAGACCTGGTGTCATCGGGTCCATGTTCAAGGCTGTGCAGGACACTGTTGTGCACGCCAAGGACGCTGTCGTCGGAAAAAGTTATGAAACCGGGGATGTTAGAGGCAGAGCAGGGGAAACAGGGTCCAAAATGGGAGAATACACAGATTATGGTGTTCAGAAGGCAAGGGAAACAAACGAGGCGGCGAAACAGAAAACTGGTGAGTATGCTGATTATGCTTCTCAGAAAGCAAGAGAAACCAGAGACACCACGGTGAACAAAACAGGGGAATATACAGATTATGCTGCAGATAAGGCGAAGCAAGCAAAGGACACAACAGTGAACAAAGCTGGAGAGTACACGAATTATGCTGCTGAGAAAGCGAAGGAAGCTAAGGATGCGACGATGAATAAGGCTGGGGAATACACAAACTATGCTGGAGAGAAGGCGAAGGAAGCTAAGGATGCAACAATGAATAAGGCAGGAGAGTACACGAACTATGCTGGAGAGAAGGCGAAGGAGGCGAAGGATGCTACGGTGAATATGGCAGGGGCAGCCAAAGACACGACAGTGCAGAAAGCAGGGGAAGCTAAGGATTACACTGCTCAGAAGGCGAAAGAAGGGAAGGACGCGACGGTGGGGACGCTTGGGGGGCTGAAGGACTCTGTTATGGGTTTCTTCACTGGGAAGAAAGATGAAACTGCAGAGAAAGCTGTGGAGGCAAAGGATAGGACAAAGGACATGCTGAGCGGGTCAATGGAGGGAGACTCGAGGAGGAGAATGGAAGAGCTGAGGGTGCAAGAAGGAGGGCGGGGTGGAGAGAAAGTGGTGGTGAGAATGGAAGAGTCCAGGCCAGGGGTGGTGGCGGATGCTCTCAGAGCTGCGAATGAGAGTATCAGTGATAAGGGAGCATTGGATGAAGAAGGTGTCATTCATGTGGAGCGTCGTCGTGAGAAAATGTGA	1200	0.52	MASSQQPFKGDRAEAAAKLAAKDIGDINRANERDEGFSLNKEANFKQARAEAAAKLAAKDLEDVNRARDAAFGSGGGASVEYQNQQRPGVIGSMFKAVQDTVVHAKDAVVGKSYETGDVRGRAGETGSKMGEYTDYGVQKARETNEAAKQKTGEYADYASQKARETRDTTVNKTGEYTDYAADKAKQAKDTTVNKAGEYTNYAAEKAKEAKDATMNKAGEYTNYAGEKAKEAKDATMNKAGEYTNYAGEKAKEAKDATVNMAGAAKDTTVQKAGEAKDYTAQKAKEGKDATVGTLGGLKDSVMGFFTGKKDETAEKAVEAKDRTKDMLSGSMEGDSRRRMEELRVQEGGRGGEKVVVRMEESRPGVVADALRAANESISDKGALDEEGVIHVERRREKM*	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g0764	399	Gene3D	-	130	178	-	-
	Lja1g0764	399	Gene3D	-	258	307	-	-
	Lja1g0764	399	Gene3D	-	179	225	-	-
	Lja1g0764	399	PANTHER	LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63	45	397	-	-
	Lja1g0764	399	MobiDBLite	consensus disorder prediction	145	169	-	-
	Lja1g0764	399	Pfam	Late embryogenesis abundant protein	178	221	IPR004238	-
	Lja1g0764	399	Pfam	Late embryogenesis abundant protein	222	265	IPR004238	-
	Lja1g0764	399	Pfam	Late embryogenesis abundant protein	260	297	IPR004238	-
	Lja1g0764	399	Pfam	Late embryogenesis abundant protein	134	177	IPR004238	-
	Lja1g0764	399	PANTHER	-	45	397	-	-
	Lja1g0764	399	MobiDBLite	consensus disorder prediction	316	353	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g0764	-		-	lja:Lj1g3v4692910.1	588.956

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja1g0764	1	7424349	7426079	Lja1g0764	1	7424349	7426079	ECH
	Lja1g0764	1	7424349	7426079	Lja5g2556	5	50220748	50222473	PCT