Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0670 ATGGCTTCCACTACTACTACTAACATCAGTGACATACACGCAGACATAATCGAAGCCCATATTCTGACGGGCCTCGACGGGCCTGGGCTTGCCTCGGTGGCCAGCACGTGCACCCACCTTAAAGCCCTCTCAGTTCAAGCCCACCTCTGGGCCAATATTTGCCGCACCACGTGGCCCACCACCAACAATCCACGCGTCCGCCACTTCATTTCCACGCTTCCCAACGCCTCTCGCTCTTTCTTCGCCGATTCTTTCCCCGCCGCAACCGCAACCGCAACAACCGAATCCAAAACCGTCAATCTCGATCGCACGCCGGAGCTGATCTCCGCCGTGGACATCTTCCACGGCGACCGGCTCGTCTTGTCGCGGGTGGTGGAGACCGAGACGGAGAGCGGCTGGTTCCGGTGCTCGCCGTTTCGCGTTGACTTGCTGGACCCGAAGGATACGGTGGAGACGGGGGTGGAGTACCCGAGGAGCGAGGAGGCGTGTGGTGATCTGAAGGAGGAGCTGAGGCTGAGCTGGATTGTGATTGACCCGAACGGGGGACGCGCGGTGAACGTGTCGAGCGGGGAGGCGGTGACGGTGCGGCGGCACTGGCTGAGCGGGGAGGTGCAGGCGAGGTTCGCGACGGTGGTGGGAGGAGGGGAGATTGGGTCGGCGAAGGAGGCGGCGTTGTGCAGTGTGACAGTGACGTTTGGCTGGGAAATGCAGGTGAAGGAGGTGAGTTTTCAGATGGAGGACATGGATGGGATGCAATTGAGTGGGAGGGATAGTTTGGGGATTTTGCAGAGGTTGTTGGAGGGTAAAAGGGGGAAATTGAGAGAAGAAGGAAGGAGAAATGGGTACATGGAATTCATGAAGAGGAAGGAGGAGAGGAAAGAGAGGAAAGTGAGGGCTGAAAGAAGGTTGGATATTCTTTGCGTGGGTGTTGCTGCCTTCTCCTTTGTGGCGGTTTCCACTTTCTTTCTCTTCTGA 975 0.5805 MASTTTTNISDIHADIIEAHILTGLDGPGLASVASTCTHLKALSVQAHLWANICRTTWPTTNNPRVRHFISTLPNASRSFFADSFPAATATATTESKTVNLDRTPELISAVDIFHGDRLVLSRVVETETESGWFRCSPFRVDLLDPKDTVETGVEYPRSEEACGDLKEELRLSWIVIDPNGGRAVNVSSGEAVTVRRHWLSGEVQARFATVVGGGEIGSAKEAALCSVTVTFGWEMQVKEVSFQMEDMDGMQLSGRDSLGILQRLLEGKRGKLREEGRRNGYMEFMKRKEERKERKVRAERRLDILCVGVAAFSFVAVSTFFLF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0670 324 PANTHER F-BOX PROTEIN-RELATED 3 318 IPR045283 -
Lja1g0670 324 PANTHER OS12G0156500 PROTEIN 3 318 - -
Lja1g0670 324 SUPERFAMILY F-box domain 19 78 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0670 Lja-Chr1 6284761 6286363 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0670 - - vra:106757292 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0670 1 6284761 6286363 Lja1g0670 1 6284761 6286363 ECH
Lja5g1242 5 12430005 12431913 Lja1g0670 1 6284761 6286363 PCT