Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0638 ATGGATATTGAGTCAACAATGCCAGTAAACAAAGCTGGATTTTTAGCCAGCCTCAAGGCTTTGCCTACAAACTCCAAGTCCAAGGTTATCAATGCTGCAAGAAGTATAAAGAAAATTGGACAAGATGATCCGCGACGAGTTATTCATTCGCTAAAAGTGGGGCTTGCCCTCACATTGGTGTCCTTGTTTTACTACTTGAGGCCTCTTTATGATGGTCTCGGAGTTACGGGAATGTGGGCTGTTCTTACTGTGGTGGTGGTGTTTGAATTCACAGTAGGTGCAACACTCAGCAAAAGCTTAAATAGAGGATTTGCTACACTATTAGCATGTGCTTTAGGGGTTGGAGGTCATCACTTAGCTACTGCTTTTGGAGAGAGAGGAGAAGCAATTATCATTGGGACCCTTGTCTTCATTCTAGCTGCAGGGTCTACATTTCTCAGATTTTTTCCCAGGATCAAGGCTAGATATGACTATGGGATGGTGGTTTTTATATTAACATTCTGTTTGGTTGCGGTTTCGGGGTACCGAATTGAGGAACTCTTTGAGCTAGCCCATCAGAGACTATCAACAATCATATTAGGGGCTGCAACCTGCATGGTCATCTCCATATTCATTTGTCCAGTGTGGGCAGGAGAGGACCTTCACAAATTGATAGCTTCAAATATCGAAAAGCTAGCAAATTACCTAGAAGGGTTTGAAGGCGAATATTTTCATTGCTCAGACGATAAAGAAAAATCTAAGTCCCTTCTTCAACAATATAAAAGTGTTCTTAATTCCAAAACTACTGAAGAGACATTGGCAAATTTGGCAAGGTGGGAACCAGGTCATGGCAATTTTAGTCTTCATCACCCTTGGAAGCAATACTTGAAGATTGGAACGCTTGCTAGAGAATGTGCTTACAAGATTGAAACTCTTAACAAATACCTCAACCCTGAAATCCAATCATCTTTGGAATTCAAGTATAAAGTGGAAGAATCATGCATGAAGATGTGTTCAGAGTCCAACAAGGCATTAAAGACAATATCTTCGTCAATCAAAACAATGACAGACCCATCGGCCGCTAAAAGCCACATTGCAAATTCAAAAACTGCAATCAAAGACCTCAAAATTGCACTGGAAACTATTTCGTTTGAAGATGCGGAAGTCTTTGATATAATCCCAATTGCTGCAGTTGCAGCAATACTTGCAGAAATCACCAAGTCTGTGGAGAAAATTTATGAATCTGTTTCTGAGCTTTCTGATTTAGCTCATTTCAAGAGTGTAGAACCCAATGTCTCACCAGAGAAACCAGCCCTACTTCATCGAGGAATCATAAATCCTGTTGCGGACAATGAAAAGGAAGATCATGTTGAAATTATAATCCAAGAGATGAGTACAGACTCCCCAGAAAAAGAAAAAGAAAATCCTCTGAACGTTTGTGCAGCTGTAATTAGTTGTAATTAA 1443 0.4019 MDIESTMPVNKAGFLASLKALPTNSKSKVINAARSIKKIGQDDPRRVIHSLKVGLALTLVSLFYYLRPLYDGLGVTGMWAVLTVVVVFEFTVGATLSKSLNRGFATLLACALGVGGHHLATAFGERGEAIIIGTLVFILAAGSTFLRFFPRIKARYDYGMVVFILTFCLVAVSGYRIEELFELAHQRLSTIILGAATCMVISIFICPVWAGEDLHKLIASNIEKLANYLEGFEGEYFHCSDDKEKSKSLLQQYKSVLNSKTTEETLANLARWEPGHGNFSLHHPWKQYLKIGTLARECAYKIETLNKYLNPEIQSSLEFKYKVEESCMKMCSESNKALKTISSSIKTMTDPSAAKSHIANSKTAIKDLKIALETISFEDAEVFDIIPIAAVAAILAEITKSVEKIYESVSELSDLAHFKSVEPNVSPEKPALLHRGIINPVADNEKEDHVEIIIQEMSTDSPEKEKENPLNVCAAVISCN* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0638 480 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 8 13 467 - -
Lja1g0638 480 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 13 467 - -
Lja1g0638 480 Pfam Aluminium activated malate transporter 38 413 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0638 Lja-Chr1 5927528 5929743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0638 1 456 Miscellaneous Gene Families AT3G11680 55.889 1.16e-175 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0638 - - aprc:113860951 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0638 1 5927528 5929743 Lja1g0638 1 5927528 5929743 ECH
Lja1g0638 1 5927528 5929743 Lja5g1990 5 25860784 25864202 PCT