Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0531 ATGGCCCCTGACTTAACCACCGCTGCTACTCCCATTACCACCACTGAGCAACCCTTAGCCACCCGTGCCTTTGTCACTTTCCTTGCCGGTAACGGTGACTATGTGAAGGGTGTTGTTGGGTTGGCCAAAGGACTGAGGAAGGTCCAGTCAATCTACCCTCTTGTGGTTGCTATTTTGCCTGATGTTCCTGAGGAGCACCGTAAGATCTTGCTCTCTCAAGGTTGCATTGTCAGGGAGATTGTGCCGGTGTACCCGCCGAAGAATCAAACCCAGTTTGCCCATGCCTATTATGTAATCAATTACTCCAAGCTGCGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATCTACCTAGATGGTGACATTCAGGTTTTTGAGAACATTGACCACTTGTTTGACATGCCTGATAACCAATTTTATGCTGTGAAGGACTGTTTCTGTGAGCCCAGTTGGCGCCACACTAAGCAGTACTCAATCAAGTACTGCCAACAATGCCCTGATAAGGTTGACTGGCCCTCTAATTTTGGTCCTAGGCCCCCTCTCTATTTCAATGCTGGGTTTTTTGTTTATGAGCCTAATTTGGAAACTTACCATGATCTCCTCAAAACATGCGAAGCCACCACACCCACTTCCTTTGCTGAACAGGATTTTCTGAACATGTACTTTAGGGATAAGTACAAGCCTATTCCTAATGTGTACAACCTTGTGCTGGCCATGTTGTGGCGTCATCCTGAGAATGTTCAACTTGACAAAGTTAAAGTTGTTCACTATTGTGCTTTTGGATCAAAGCCTTGGAGGTTCACGGGAGAGGAAGAGAACATGGACAGAAAAGACATCAAGATGCTTGTGAAGAAATGGTGGGATATTTATGAGGATGAGACATTGGATTGGAACTACATTAATCCAAGCTACACGGAGAAGGTGTTGATTGATGGTGGTGGCGTTAAGAATGTGTCTGCTCCATCTGCTGCTTAA 975 0.4564 MAPDLTTAATPITTTEQPLATRAFVTFLAGNGDYVKGVVGLAKGLRKVQSIYPLVVAILPDVPEEHRKILLSQGCIVREIVPVYPPKNQTQFAHAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDMPDNQFYAVKDCFCEPSWRHTKQYSIKYCQQCPDKVDWPSNFGPRPPLYFNAGFFVYEPNLETYHDLLKTCEATTPTSFAEQDFLNMYFRDKYKPIPNVYNLVLAMLWRHPENVQLDKVKVVHYCAFGSKPWRFTGEEENMDRKDIKMLVKKWWDIYEDETLDWNYINPSYTEKVLIDGGGVKNVSAPSAA* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0531 324 Pfam Glycosyl transferase family 8 26 267 IPR002495 GO:0016757
Lja1g0531 324 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 19 296 IPR029044 -
Lja1g0531 324 PANTHER GALACTINOL SYNTHASE 1 1 303 - -
Lja1g0531 324 CDD GT8_Glycogenin 22 292 - -
Lja1g0531 324 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 303 - -
Lja1g0531 324 SUPERFAMILY Nucleotide-diphospho-sugar transferases 25 295 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0531 Lja-Chr1 4867007 4869103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0531 1 324 Glycosyltransferase AT1G56600 69.851 7.44e-177 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0531 K18819 - gmx:548050 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0531 1 4867007 4869103 Lja1g0531 1 4867007 4869103 ECH
Lja1g0531 1 4867007 4869103 Lja5g1354 5 13580830 13582569 PCT