Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0413 ATGGTACGCGCAAATGTCCTACTTGGGGAACTTGTCATACTCCATTCCCGAAATCAAGGGAACCTCTTGAAAAAACATGGTCTGCGTTTTGTAACTTCATCAATAGAAAAGAGGGAATCAGCTACAACAGCTGGAAAAAATCAAGCATCTGCTGCAGTTCAGAAGGAAGAAAGTGGCGGGAAGGATGATGCTGGAGGAACAAAAGAGCAAAAGAATGATGGATCAAAGATAAGTGCAGCTGCTGCTTATGAGATTGCGGCCTCTGCTGCCTCTTATCTTCATGCTCAGACAAAGAATATACTTCCATTCAAGTCTTCTAATGCTGTGGACGGTGAAGGTTCACTTGAAGCAACCAATGAAAGCGCTGAAAGTGTTAAGGCGAGAGAAACGGAGGTTGAGTCTTTGAGGACAACAACTGATTCAGTGACGGCAGTAGTTGCTGCAAATGAGGAAGTAAAACAGGCCTTTGCTGATGATTTGAACTCAACAAGTTCTTCACCCTGTGAATGGTTCACATGTGATGATGACCAAAGTTCTACACGTTATTTTGTTATTCAGGGTTCAGAATCATTTGCATCATGGCAGGCTAACTTGCTTTTTGAGCCAGTTCAGTTTGAGGGGTTGGATGTCCTTGTACATAGGGGTATATATGAGGCTGCAAAAGGGACATATCAACAGATGTTGCCAGAGGTTCATGCTCACCTAAAATCTCGAGGCTCTTGTGCAACTTTCCGTTTTACTGGCCATTCTCTTGGGGGGAGCTTGGCATTACTTGTAAATCTTATGCTGTTGATAAGGAAGGAAGTGCCAATATCTTCTTTGCTTCCTGTAATAACCTTTGGCTCCCCCAGCATCATGTGTGGAGGTGATAGTCTGCTAGACAAGCTAGGATTGCCTCGGAGTCATGTTCAGGCAATTACAATGCATAGGGATATAGTGCCGCGAGCATTTTCTTGCCAGTACCCTACCCATGTTGCAGAACTACTTAAGGCTGTTAATGGCAGCTTCCGCGGTCATCCCTGTCTTAATAACCTGAAGCTATTATATGCACCGATGGGTGAGCTACTGATTCTACAGCCTGATGAGAAATTTTCACCAAGCCATGATCTCCTTCCATCAGGTTGTGGTCTATATCTTCTGAGTGGTGCTATGCTAGAATCCCTTGACAGGGACGAGCAGCTCCGAGCTGCTAAGCTGGTCTTCTTGAACTCACCACATCCACTTGAAATATTAAGTGAAAGATGTGCCTATGGATCTGGAGGAACTATACAGAGAGATCATGACATGAATTCCTATTTTAAATCTGTTCGAGCGGTGATTCGTCAACAACTTAACCAGATTCGCAAGATAAAGAGAGAGCAACGACGAAAGGTTTGGTGGCCTCTTGTGCTACTGCGTGGAAGTGATTCCAATATTGTTGTCAGAAGATCCACGGCATCCGTCAATATGGTTCAAGACCAGCCTTCCTTCTCCGGCATCATACAGACAGGGGTAGAGAGTCCTTGA 1506 0.4462 MVRANVLLGELVILHSRNQGNLLKKHGLRFVTSSIEKRESATTAGKNQASAAVQKEESGGKDDAGGTKEQKNDGSKISAAAAYEIAASAASYLHAQTKNILPFKSSNAVDGEGSLEATNESAESVKARETEVESLRTTTDSVTAVVAANEEVKQAFADDLNSTSSSPCEWFTCDDDQSSTRYFVIQGSESFASWQANLLFEPVQFEGLDVLVHRGIYEAAKGTYQQMLPEVHAHLKSRGSCATFRFTGHSLGGSLALLVNLMLLIRKEVPISSLLPVITFGSPSIMCGGDSLLDKLGLPRSHVQAITMHRDIVPRAFSCQYPTHVAELLKAVNGSFRGHPCLNNLKLLYAPMGELLILQPDEKFSPSHDLLPSGCGLYLLSGAMLESLDRDEQLRAAKLVFLNSPHPLEILSERCAYGSGGTIQRDHDMNSYFKSVRAVIRQQLNQIRKIKREQRRKVWWPLVLLRGSDSNIVVRRSTASVNMVQDQPSFSGIIQTGVESP* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0413 501 Pfam Lipase (class 3) 183 320 IPR002921 GO:0006629
Lja1g0413 501 Gene3D alpha/beta hydrolase 118 346 IPR029058 -
Lja1g0413 501 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 19 498 IPR043367 GO:0008970
Lja1g0413 501 MobiDBLite consensus disorder prediction 110 129 - -
Lja1g0413 501 MobiDBLite consensus disorder prediction 37 74 - -
Lja1g0413 501 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 19 498 - -
Lja1g0413 501 CDD Lipase_3 136 324 - -
Lja1g0413 501 MobiDBLite consensus disorder prediction 37 54 - -
Lja1g0413 501 MobiDBLite consensus disorder prediction 56 70 - -
Lja1g0413 501 SUPERFAMILY alpha/beta-Hydrolases 164 350 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0413 Lja-Chr1 3619628 3623018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0413 20 500 Acyl Lipid Metabolism Gene Families AT1G02660 63.299 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0413 - - lja:Lj1g3v4863030.1 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0413 1 3619628 3623018 Lja1g0413 1 3619628 3623018 ECH
Lja1g0413 1 3619628 3623018 Lja5g1217 5 12161136 12164919 PCT